Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   QYE84_RS05175 Genome accession   NZ_CP129369
Coordinates   1066357..1067403 (+) Length   348 a.a.
NCBI ID   WP_053017422.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain CJFE-402M     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1061357..1072403
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYE84_RS05150 map 1062212..1062964 (+) 753 WP_011275369.1 type I methionyl aminopeptidase -
  QYE84_RS05155 - 1063102..1063959 (-) 858 WP_037537967.1 SDR family oxidoreductase -
  QYE84_RS05160 - 1064028..1065035 (-) 1008 WP_301402768.1 HoxN/HupN/NixA family nickel/cobalt transporter -
  QYE84_RS05165 - 1065248..1065634 (+) 387 WP_037537962.1 hypothetical protein -
  QYE84_RS05170 liaF 1065659..1066360 (+) 702 WP_053019075.1 cell wall-active antibiotics response protein LiaF -
  QYE84_RS05175 vraS 1066357..1067403 (+) 1047 WP_053017422.1 sensor histidine kinase Regulator
  QYE84_RS05180 vraR 1067393..1068022 (+) 630 WP_037551137.1 two-component system response regulator VraR Regulator
  QYE84_RS05185 - 1068085..1069296 (-) 1212 WP_037537956.1 YihY/virulence factor BrkB family protein -
  QYE84_RS05190 - 1069497..1069781 (-) 285 WP_011275378.1 YtxH domain-containing protein -
  QYE84_RS05195 - 1069787..1070251 (-) 465 WP_037537954.1 low molecular weight protein-tyrosine-phosphatase -
  QYE84_RS05200 - 1070393..1070602 (+) 210 WP_080290985.1 DUF1128 domain-containing protein -
  QYE84_RS05205 - 1070616..1071863 (+) 1248 WP_053017420.1 aminopeptidase -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40180.57 Da        Isoelectric Point: 5.8508

>NTDB_id=852851 QYE84_RS05175 WP_053017422.1 1066357..1067403(+) (vraS) [Staphylococcus haemolyticus strain CJFE-402M]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSILAYKINQQNQWIKS
QIEHAIEGETVGINDQNIELYNETIDIYQTLVPLNQELHRLRMKTQNLTNENYNMNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEAPLDQQIPVLEKMVQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIHDI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNQQDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNREDDNNDD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=852851 QYE84_RS05175 WP_053017422.1 1066357..1067403(+) (vraS) [Staphylococcus haemolyticus strain CJFE-402M]
ATGAACCACTACTTAAGAGCTATCGGTTCAATGCTTATACTAGTTTATAGCATGTTAACCGCGTTCTTATTTATAGATAA
AGTATTTGTTAATATTATCTATTTCCAAGGTATGTTTTATACTCAAATTTTTGGGATACCTGTTTTTCTATTTTTAAATT
TAGTCATCATTTTACTTTGTATTATAGTAGGTTCAATTCTCGCATATAAAATTAATCAACAAAATCAGTGGATTAAGTCG
CAAATCGAGCATGCCATTGAAGGAGAAACAGTAGGTATTAATGATCAAAACATTGAGCTCTATAACGAAACCATAGATAT
TTATCAAACATTAGTTCCGCTGAATCAAGAGTTGCATCGTTTACGAATGAAAACGCAAAACTTAACTAATGAGAATTATA
ATATGAATGATGTCAAAGTTAAGAAAATCATTGAGGATGAACGACAGAGATTAGCTCGCGAGTTACACGACTCTGTTAGT
CAACAACTTTTTGCAGCAAGTATGATGTTATCTGCAATAAAAGAAACAAAATTAGAGGCACCGCTTGATCAACAAATACC
AGTATTAGAGAAAATGGTACAGGAATCTCAACTTGAAATGCGCGCATTGTTACTTCATTTAAGACCTTTAGGACTAAAAG
ATAAATCTCTAGGTGAAGGTATCAAAGATTTAGTTATTGATTTGCAAAAGAAAGTGCCTATGAAAGTCATACACGATATT
CAAGATTTTAAGGTGCCTAAAGGTATAGAAGATCATTTATTTAGAATTACACAAGAGGCTATATCAAATACGTTAAGACA
TTCTAATGGAACTAAAGTTACAGTGGAATTATTTAACCAACAAGATTATCTATTACTTCGAATTCAAGATAATGGTAAAG
GATTCAATGTTGACGAGAAATTAGAACAAAGTTATGGATTAAAAAATATGAGGGAACGCGCATTAGAAATTGGTGCGACA
TTCCATATTGTTTCGTTACCGGATTCTGGAACGAGAATAGAAGTTAAAGCACCGTTAAATAGGGAGGATGATAATAATGA
CGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

91.643

99.713

0.914