Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   QYR55_RS01565 Genome accession   NZ_CP129328
Coordinates   281663..282922 (+) Length   419 a.a.
NCBI ID   WP_367562659.1    Uniprot ID   -
Organism   Streptococcus iniae strain Si 1-19     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 276663..287922
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYR55_RS01535 (QYR55_01535) galE 278058..279053 (+) 996 WP_367562658.1 UDP-glucose 4-epimerase GalE -
  QYR55_RS01540 (QYR55_01540) - 279106..279261 (+) 156 WP_367562344.1 hypothetical protein -
  QYR55_RS01545 (QYR55_01545) - 279230..279448 (+) 219 WP_367562345.1 hypothetical protein -
  QYR55_RS01550 (QYR55_01550) yajC 279534..279902 (+) 369 WP_003100650.1 preprotein translocase subunit YajC -
  QYR55_RS01555 (QYR55_01555) - 280072..280821 (+) 750 WP_367561796.1 isoprenyl transferase -
  QYR55_RS01560 (QYR55_01560) - 280837..281633 (+) 797 Protein_259 phosphatidate cytidylyltransferase -
  QYR55_RS01565 (QYR55_01565) eeP 281663..282922 (+) 1260 WP_367562659.1 M50 family metallopeptidase Regulator
  QYR55_RS01570 (QYR55_01570) - 282943..284799 (+) 1857 WP_367562347.1 proline--tRNA ligase -
  QYR55_RS01575 (QYR55_01575) - 284841..285398 (+) 558 WP_367562660.1 nucleotidyltransferase family protein -
  QYR55_RS01580 (QYR55_01580) - 285465..286301 (+) 837 WP_367561799.1 DUF975 family protein -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45773.62 Da        Isoelectric Point: 9.2599

>NTDB_id=852249 QYR55_RS01565 WP_367562659.1 281663..282922(+) (eeP) [Streptococcus iniae strain Si 1-19]
MLGLFTFIIVFGILVIVHEFGHFYFAKKSGILVREFAIGMGPKIFSHIDAEGTLYTIRILPLGGYVRMAGWGDDTTEIKT
GTPASLTLNDKGLVQRINLSQGKIDPTSLPMNVTDYDLEDKLFITGLVIDASKTYQVDHDATIVEEDGTEVRIAPLDVQY
QNASIWGRIITNFAGPMNNFILGILVFILLAFVQGGAFDMSSNHVRVMENGAAAKAGLKNNDQILKINQYEVRNWKELTS
AVDKATKEVGPNKALHLTVKSKGQTKELALRPQKIGKSYALGVQVGLKTGFLDKIVGGFEMGADGSVRIINALRGLIANF
SLDKLGGPVAMYQMSNQATKNGLTSVLGLMGLLSINLGLFNLIPIPALDGGKILINIIELIRRKPLKQEIESYITLAGVA
IMIILMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=852249 QYR55_RS01565 WP_367562659.1 281663..282922(+) (eeP) [Streptococcus iniae strain Si 1-19]
ATGCTAGGTTTATTTACCTTTATTATTGTTTTTGGAATATTAGTTATTGTCCATGAATTTGGGCATTTCTATTTTGCCAA
AAAATCAGGCATTCTCGTAAGAGAATTTGCCATCGGTATGGGGCCAAAAATTTTTTCTCATATTGATGCAGAAGGAACCC
TCTATACCATTCGTATTTTGCCTCTGGGAGGTTATGTTCGTATGGCCGGTTGGGGTGATGATACCACTGAAATTAAGACT
GGCACACCAGCTAGTTTAACCCTTAATGACAAAGGTTTGGTGCAACGCATCAACTTGTCCCAAGGGAAGATTGATCCAAC
CAGTTTGCCCATGAATGTGACAGACTATGATTTAGAAGATAAACTCTTCATCACAGGTCTTGTTATTGACGCGTCAAAAA
CCTATCAGGTTGACCATGATGCAACCATTGTCGAAGAAGATGGTACGGAAGTTAGAATAGCTCCCTTAGATGTACAGTAT
CAAAATGCTAGCATATGGGGAAGAATAATCACTAACTTTGCAGGGCCTATGAACAACTTTATTTTAGGAATTCTTGTCTT
TATTCTATTGGCTTTTGTTCAAGGTGGCGCTTTTGACATGTCCTCAAATCATGTGCGTGTTATGGAAAATGGTGCGGCGG
CAAAAGCTGGTCTTAAAAACAATGACCAAATTCTAAAAATCAACCAATATGAGGTTAGAAATTGGAAAGAATTAACAAGT
GCTGTTGATAAAGCAACTAAAGAAGTTGGACCAAACAAAGCTCTTCATCTTACAGTTAAGTCAAAAGGACAAACAAAAGA
ACTCGCCTTAAGGCCACAAAAAATTGGCAAATCTTATGCTTTAGGTGTGCAAGTGGGTTTAAAGACAGGCTTTTTAGATA
AAATTGTCGGTGGCTTTGAAATGGGCGCAGATGGGTCTGTGCGTATCATTAATGCCCTTCGTGGCTTAATAGCAAACTTT
AGTCTGGATAAATTAGGTGGACCTGTTGCTATGTATCAAATGTCTAATCAAGCGACTAAAAATGGCTTAACCTCTGTTCT
TGGTTTGATGGGCTTACTGTCAATCAACTTAGGCCTCTTTAACCTTATTCCCATCCCTGCCCTTGATGGTGGCAAGATAC
TTATTAATATAATTGAATTAATTCGTCGTAAACCGCTAAAACAAGAAATAGAAAGTTATATCACGCTTGCAGGAGTTGCT
ATCATGATTATTTTGATGATTGCGGTCACCTGGAATGATATCATGCGTGCCTTTTTCTAA

Domains


Predicted by InterproScan.

(6-405)

(206-259)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

67.857

100

0.68

  eeP Streptococcus thermophilus LMD-9

67.619

100

0.678