Detailed information NTG0852207

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: V6S32_RS19275
• Genome accession: NZ_CP145683
• Coordinates: 3923566..3924771 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161835.1
• Uniprot ID: -
• Organism: Escherichia coli strain S1-KEN-07-A
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3918566..3929771

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6S32_RS19260 (V6S32_19265)	-	3919081..3920757 (+)	1677	WP_001298258.1	polysaccharide biosynthesis/export family protein	-
V6S32_RS19265 (V6S32_19270)	kdsB	3920767..3921507 (+)	741	WP_000030745.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
V6S32_RS19270 (V6S32_19275)	-	3921504..3923531 (+)	2028	WP_000579517.1	capsular polysaccharide biosynthesis protein	-
V6S32_RS19275 (V6S32_19280)	kpsS	3923566..3924771 (+)	1206	WP_001161835.1	capsular biosynthesis protein	Regulator
V6S32_RS19280 (V6S32_19285)	-	3924921..3926150 (-)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
V6S32_RS19285 (V6S32_19290)	-	3926140..3927288 (-)	1149	WP_024188362.1	DUF6716 putative glycosyltransferase	-
V6S32_RS19290 (V6S32_19295)	neuC	3927281..3928456 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
V6S32_RS19295 (V6S32_19300)	-	3928453..3929709 (-)	1257	WP_001259305.1	GDSL-type esterase/lipase family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47858.21 Da
• Isoelectric Point: 10.0398

>NTDB_id=852207 V6S32_RS19275 WP_001161835.1 3923566..3924771(+) (kpsS) [Escherichia coli strain S1-KEN-07-A]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=852207 V6S32_RS19275 WP_001161835.1 3923566..3924771(+) (kpsS) [Escherichia coli strain S1-KEN-07-A]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAACGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387