Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   QYH60_RS03525 Genome accession   NZ_CP129292
Coordinates   697510..698796 (+) Length   428 a.a.
NCBI ID   WP_033900700.1    Uniprot ID   A0A4S2TCP0
Organism   Lactococcus lactis subsp. lactis strain KMGR2-43     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 692510..703796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYH60_RS03500 (QYH60_03500) rlmH 693957..694436 (+) 480 WP_003130585.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QYH60_RS03505 (QYH60_03505) - 694455..695153 (+) 699 WP_039116470.1 DNA alkylation repair protein -
  QYH60_RS03510 (QYH60_03510) yajC 695248..695580 (+) 333 WP_003130588.1 preprotein translocase subunit YajC -
  QYH60_RS03515 (QYH60_03515) - 695954..696688 (+) 735 WP_003130589.1 isoprenyl transferase -
  QYH60_RS03520 (QYH60_03520) - 696688..697491 (+) 804 WP_003130590.1 phosphatidate cytidylyltransferase -
  QYH60_RS03525 (QYH60_03525) eeP 697510..698796 (+) 1287 WP_033900700.1 RIP metalloprotease RseP Regulator
  QYH60_RS03530 (QYH60_03530) - 698866..700716 (+) 1851 WP_301401293.1 proline--tRNA ligase -
  QYH60_RS03535 (QYH60_03535) - 700732..702063 (+) 1332 WP_301401295.1 FAD/NAD(P)-binding oxidoreductase -
  QYH60_RS03540 (QYH60_03540) - 702069..702605 (+) 537 WP_039116464.1 hypothetical protein -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46383.91 Da        Isoelectric Point: 6.5147

>NTDB_id=852079 QYH60_RS03525 WP_033900700.1 697510..698796(+) (eeP) [Lactococcus lactis subsp. lactis strain KMGR2-43]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVVNPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIINLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=852079 QYH60_RS03525 WP_033900700.1 697510..698796(+) (eeP) [Lactococcus lactis subsp. lactis strain KMGR2-43]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAGGAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCACTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAGTAAATCCAGAAGCTGAAAATTCTGTCAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCAATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACAGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCGGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATAATCGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCAGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGTTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGCCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCTACAGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGATAAACTTGGTGGTCCAGTTGCTATTTATCAACTCAGTGGCCAAGCCGC
GAGAGCAGGTTTGCCGACGATTATTAATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTTCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
AAATTAA

Domains


Predicted by InterproScan.

(7-413)

(218-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4S2TCP0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.845

100

0.572

  eeP Streptococcus thermophilus LMD-9

56.613

100

0.57