Detailed information NTG0085202

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QUE31_RS21975
• Genome accession: NZ_AP027254
• Coordinates: 4420608..4421633 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain JNE120442
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4415608..4426633

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUE31_RS21945 (JNE120442_41760)	zapB	4415692..4415937 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
QUE31_RS21950 (JNE120442_41770)	rraA	4416022..4416507 (-)	486	WP_000872909.1	ribonuclease E activity regulator RraA	-
QUE31_RS21955 (JNE120442_41780)	menA	4416600..4417526 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QUE31_RS21960 (JNE120442_41790)	hslU	4417593..4418924 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
QUE31_RS21965 (JNE120442_41800)	hslV	4418934..4419464 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QUE31_RS21970 (JNE120442_41810)	ftsN	4419557..4420516 (-)	960	WP_286356063.1	cell division protein FtsN	-
QUE31_RS21975 (JNE120442_41820)	cytR	4420608..4421633 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QUE31_RS21980 (JNE120442_41830)	priA	4421789..4423987 (-)	2199	WP_194881898.1	primosomal protein N'	Machinery gene
QUE31_RS21985 (JNE120442_41840)	rpmE	4424190..4424402 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
QUE31_RS21990 (JNE120442_41850)	yiiX	4424463..4425071 (-)	609	WP_000702299.1	YiiX family permuted papain-like enzyme	-
QUE31_RS21995 (JNE120442_41860)	metJ	4425131..4425448 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=85202 QUE31_RS21975 WP_000644904.1 4420608..4421633(-) (cytR) [Escherichia coli strain JNE120442]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=85202 QUE31_RS21975 WP_000644904.1 4420608..4421633(-) (cytR) [Escherichia coli strain JNE120442]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628