Detailed information NTG0851656

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: QU522_RS17470
• Genome accession: NZ_CP129219
• Coordinates: 3606549..3607349 (+)
• Length: 266 a.a.
• NCBI ID: WP_004145898.1
• Uniprot ID: -
• Organism: Klebsiella pneumoniae subsp. pneumoniae strain Kp3412_LBHALD
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3601549..3612349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QU522_RS17435 (QU522_17435)	gspH	3601702..3602217 (+)	516	WP_021313445.1	type II secretion system minor pseudopilin GspH	-
QU522_RS17440 (QU522_17440)	gspI	3602214..3602579 (+)	366	WP_002889025.1	type II secretion system minor pseudopilin GspI	-
QU522_RS17445 (QU522_17445)	gspJ	3602576..3603172 (+)	597	WP_012737414.1	type II secretion system minor pseudopilin GspJ	-
QU522_RS17450 (QU522_17450)	gspK	3603169..3604155 (+)	987	WP_004178610.1	type II secretion system minor pseudopilin GspK	-
QU522_RS17455 (QU522_17455)	gspL	3604142..3605338 (+)	1197	WP_064145608.1	type II secretion system protein GspL	-
QU522_RS17460 (QU522_17460)	-	3605331..3605816 (+)	486	WP_023312675.1	type II secretion system protein M	-
QU522_RS17465 (QU522_17465)	-	3605806..3606552 (+)	747	WP_004145897.1	type II secretion system protein N	-
QU522_RS17470 (QU522_17470)	pilD	3606549..3607349 (+)	801	WP_004145898.1	A24 family peptidase	Machinery gene
QU522_RS17475 (QU522_17475)	hrpB	3607397..3609826 (-)	2430	WP_064145607.1	ATP-dependent helicase HrpB	-
QU522_RS17480 (QU522_17480)	thpR	3609899..3610435 (+)	537	WP_004177389.1	RNA 2',3'-cyclic phosphodiesterase	-
QU522_RS17485 (QU522_17485)	sfsA	3610435..3611151 (+)	717	WP_002888848.1	DNA/RNA nuclease SfsA	-
QU522_RS17490 (QU522_17490)	dksA	3611314..3611769 (+)	456	WP_002888845.1	RNA polymerase-binding protein DksA	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29389.01 Da
• Isoelectric Point: 8.8894

>NTDB_id=851656 QU522_RS17470 WP_004145898.1 3606549..3607349(+) (pilD) [Klebsiella pneumoniae subsp. pneumoniae strain Kp3412_LBHALD]
MTTLAALSLHFPFVWYGFLLLFGLALGSFYNVVIYRLPRMLTQTADDERITLSTPGSSCPQCRQPIAWRDNIPLLSFLWL
GRRARCCQAPIAWSYPLTELATGLLFILAGALLAPGLPLAGGLVLLSFLLILARIDARTQLLPDRLTLPLLWAGLLFNLN
EVYIALPDAVAGAMAGYLALWSVYWLFRLLTGKEALGYGDFKLLAALGAWCGWQVLPQVLLLASASGLVWTLLQRLWTRQ
SLQQPLAFGPWLALAGGGIFLWQQMV

Nucleotide

• Length: 801 bp

>NTDB_id=851656 QU522_RS17470 WP_004145898.1 3606549..3607349(+) (pilD) [Klebsiella pneumoniae subsp. pneumoniae strain Kp3412_LBHALD]
ATGACGACACTAGCCGCGTTATCGCTGCACTTTCCCTTTGTCTGGTATGGCTTTCTGCTGCTGTTCGGCCTGGCGCTGGG
CAGCTTTTACAATGTGGTGATCTATCGTCTGCCGCGCATGTTGACCCAGACCGCGGACGACGAGCGGATAACCCTCAGCA
CCCCGGGATCTTCCTGCCCGCAGTGCCGCCAGCCGATCGCCTGGCGGGACAATATCCCGCTGCTCAGTTTCCTCTGGCTG
GGCCGTCGCGCCCGCTGCTGTCAGGCGCCCATCGCGTGGAGCTATCCGCTGACCGAGCTGGCCACCGGCCTGCTGTTTAT
CCTCGCCGGAGCTTTGCTGGCGCCGGGCCTGCCGCTGGCGGGCGGCCTGGTGCTGCTCTCGTTCCTGCTGATACTGGCGC
GGATTGACGCCCGGACCCAGCTGCTGCCCGATCGCCTGACTCTGCCCCTGCTGTGGGCCGGGCTGCTGTTCAATCTTAAC
GAGGTGTACATTGCCCTGCCGGATGCGGTCGCCGGGGCGATGGCCGGTTATCTGGCGCTGTGGTCGGTCTACTGGCTGTT
CCGCCTGCTGACCGGGAAAGAGGCGCTGGGCTATGGCGATTTTAAGCTGCTGGCGGCGCTGGGCGCCTGGTGCGGCTGGC
AGGTTCTGCCGCAGGTGCTGTTGCTCGCTTCGGCCAGCGGGCTGGTGTGGACCCTGCTGCAACGCCTGTGGACCCGGCAG
TCGCTGCAGCAGCCGCTGGCCTTCGGCCCCTGGCTGGCGCTGGCCGGCGGGGGTATTTTTCTCTGGCAGCAGATGGTCTA
G

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-109)

• Type IV leader peptidase family (Peptidase_A24) (123-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	49.434	99.624	0.492
pilD	Vibrio campbellii strain DS40M4	46.182	100	0.477
pilD	Acinetobacter nosocomialis M2	46.008	98.872	0.455
pilD	Acinetobacter baumannii D1279779	45.247	98.872	0.447
pilD	Neisseria gonorrhoeae MS11	43.295	98.12	0.425