Detailed information NTG0851509

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: QTL73_RS20435
• Genome accession: NZ_CP129202
• Coordinates: 4217864..4218664 (+)
• Length: 266 a.a.
• NCBI ID: WP_004145898.1
• Uniprot ID: -
• Organism: Klebsiella pneumoniae strain HMKP141603t
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4212864..4223664

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QTL73_RS20400 (QTL73_20400)	gspH	4213020..4213535 (+)	516	WP_032414529.1	type II secretion system minor pseudopilin GspH	-
QTL73_RS20405 (QTL73_20405)	gspI	4213532..4213897 (+)	366	WP_002889025.1	type II secretion system minor pseudopilin GspI	-
QTL73_RS20410 (QTL73_20410)	gspJ	4213894..4214490 (+)	597	WP_004145893.1	type II secretion system minor pseudopilin GspJ	-
QTL73_RS20415 (QTL73_20415)	gspK	4214487..4215473 (+)	987	WP_077254427.1	type II secretion system minor pseudopilin GspK	-
QTL73_RS20420 (QTL73_20420)	gspL	4215460..4216653 (+)	1194	WP_004191957.1	type II secretion system protein GspL	-
QTL73_RS20425 (QTL73_20425)	-	4216646..4217131 (+)	486	WP_023312675.1	type II secretion system protein M	-
QTL73_RS20430 (QTL73_20430)	-	4217121..4217867 (+)	747	WP_087791831.1	type II secretion system protein N	-
QTL73_RS20435 (QTL73_20435)	pilD	4217864..4218664 (+)	801	WP_004145898.1	A24 family peptidase	Machinery gene
QTL73_RS20440 (QTL73_20440)	hrpB	4218712..4221141 (-)	2430	WP_064153122.1	ATP-dependent helicase HrpB	-
QTL73_RS20445 (QTL73_20445)	thpR	4221214..4221750 (+)	537	WP_004145901.1	RNA 2',3'-cyclic phosphodiesterase	-
QTL73_RS20450 (QTL73_20450)	sfsA	4221750..4222466 (+)	717	WP_002888848.1	DNA/RNA nuclease SfsA	-
QTL73_RS20455 (QTL73_20455)	dksA	4222629..4223084 (+)	456	WP_002888845.1	RNA polymerase-binding protein DksA	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29389.01 Da
• Isoelectric Point: 8.8894

>NTDB_id=851509 QTL73_RS20435 WP_004145898.1 4217864..4218664(+) (pilD) [Klebsiella pneumoniae strain HMKP141603t]
MTTLAALSLHFPFVWYGFLLLFGLALGSFYNVVIYRLPRMLTQTADDERITLSTPGSSCPQCRQPIAWRDNIPLLSFLWL
GRRARCCQAPIAWSYPLTELATGLLFILAGALLAPGLPLAGGLVLLSFLLILARIDARTQLLPDRLTLPLLWAGLLFNLN
EVYIALPDAVAGAMAGYLALWSVYWLFRLLTGKEALGYGDFKLLAALGAWCGWQVLPQVLLLASASGLVWTLLQRLWTRQ
SLQQPLAFGPWLALAGGGIFLWQQMV

Nucleotide

• Length: 801 bp

>NTDB_id=851509 QTL73_RS20435 WP_004145898.1 4217864..4218664(+) (pilD) [Klebsiella pneumoniae strain HMKP141603t]
ATGACGACACTAGCCGCGTTATCGCTGCACTTTCCCTTTGTCTGGTATGGCTTTCTGCTGCTGTTCGGCCTGGCGCTGGG
CAGCTTTTACAATGTGGTGATCTATCGTCTGCCGCGCATGTTGACCCAGACCGCGGACGACGAGCGGATAACCCTCAGCA
CCCCGGGATCTTCCTGCCCGCAGTGCCGCCAGCCGATCGCCTGGCGGGACAATATCCCGCTGCTCAGTTTCCTCTGGCTG
GGCCGTCGCGCCCGCTGCTGTCAGGCGCCCATCGCGTGGAGCTATCCGCTGACCGAGCTGGCCACCGGCCTGCTGTTTAT
CCTCGCCGGAGCTTTGCTGGCGCCGGGCCTGCCGCTGGCGGGCGGCCTGGTGCTGCTCTCGTTCCTGCTGATACTGGCGC
GGATTGACGCCCGGACCCAGCTGCTGCCCGATCGCCTGACTCTGCCCCTGCTGTGGGCCGGGCTGCTGTTCAATCTTAAC
GAGGTGTACATTGCCCTGCCGGATGCGGTCGCCGGGGCGATGGCCGGTTATCTGGCGCTGTGGTCGGTCTACTGGCTGTT
CCGCCTGCTGACCGGGAAAGAGGCGCTGGGCTATGGCGATTTTAAGCTGCTGGCGGCGCTGGGCGCCTGGTGCGGCTGGC
AGGTTCTGCCGCAGGTGCTGTTGCTCGCTTCGGCCAGCGGGCTGGTGTGGACCCTACTGCAACGCCTGTGGACCCGGCAG
TCGCTGCAGCAGCCGCTGGCCTTCGGCCCCTGGCTGGCGCTGGCCGGCGGGGGTATTTTTCTCTGGCAGCAGATGGTCTA
G

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-109)

• Type IV leader peptidase family (Peptidase_A24) (123-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	49.434	99.624	0.492
pilD	Vibrio campbellii strain DS40M4	46.182	100	0.477
pilD	Acinetobacter nosocomialis M2	46.008	98.872	0.455
pilD	Acinetobacter baumannii D1279779	45.247	98.872	0.447
pilD	Neisseria gonorrhoeae MS11	43.295	98.12	0.425