Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LLUC029_RS11980 Genome accession   NZ_CP129163
Coordinates   2286577..2287863 (-) Length   428 a.a.
NCBI ID   WP_011677189.1    Uniprot ID   A0A165FD42
Organism   Lactococcus cremoris strain UC029     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2281577..2292863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLUC029_RS11960 - 2282082..2282675 (-) 594 Protein_2330 PolC-type DNA polymerase III N-terminal domain-containing protein -
  LLUC029_RS11965 (LLUC029_11985) - 2282849..2283040 (-) 192 WP_021211222.1 hypothetical protein -
  LLUC029_RS11970 (LLUC029_11990) - 2283310..2284641 (-) 1332 WP_021211223.1 FAD/NAD(P)-binding oxidoreductase -
  LLUC029_RS11975 (LLUC029_11995) - 2284657..2286507 (-) 1851 WP_011836051.1 proline--tRNA ligase -
  LLUC029_RS11980 (LLUC029_12000) eeP 2286577..2287863 (-) 1287 WP_011677189.1 RIP metalloprotease RseP Regulator
  LLUC029_RS11985 (LLUC029_12005) - 2287882..2288685 (-) 804 WP_011677190.1 phosphatidate cytidylyltransferase -
  LLUC029_RS11990 (LLUC029_12010) - 2288685..2289419 (-) 735 WP_032951303.1 isoprenyl transferase -
  LLUC029_RS11995 (LLUC029_12015) yajC 2289769..2290101 (-) 333 WP_011677192.1 preprotein translocase subunit YajC -
  LLUC029_RS12000 (LLUC029_12020) - 2290196..2290894 (-) 699 Protein_2338 DNA alkylation repair protein -
  LLUC029_RS12005 (LLUC029_12025) rlmH 2290912..2291391 (-) 480 WP_021164969.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 428 a.a.        Molecular weight: 46441.01 Da        Isoelectric Point: 6.5140

>NTDB_id=851368 LLUC029_RS11980 WP_011677189.1 2286577..2287863(-) (eeP) [Lactococcus cremoris strain UC029]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEAVNSGDENSVSNIVRRINLSEHVELEEAVPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIVPLDVQYQSAGVFHKMLTNFGGPLNNFILGLVAFIVLTFIQGGVPSNSNAIGQVEKGTPAYTAGLKSGDKIQAV
NGTKTADWDKLVTEISSSNGKELKLEIIRSGKSETLAVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQATTAIFRA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIIQLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSPEKES
IITLVGVVFMLVLFMAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=851368 LLUC029_RS11980 WP_011677189.1 2286577..2287863(-) (eeP) [Lactococcus cremoris strain UC029]
TTGATAGAAACTCTGATTACTTTTATTATTATTTTTGGTATTATTGTCGCTATTCATGAATATGGTCACCTTTGGTGGGC
AAAACGTTCTGGAATTCTAGTGCGTGAATATGCCGTAGGAATGGGGCCGAAGATTTTTGCTCATCAAGCAAAAGATGGAA
CGCTCTACACGATTCGAATTTTACCGCTTGGTGGCTATGTTCGTTTGGCCGGCTGGGGTGATGATAAAACTGAAATAAAA
AAAGGACAAGCTGCAAGTCTGGTTGTCAGTAAATCTGAAGCAGTAAATTCAGGAGATGAAAATTCTGTCAGTAATATTGT
CAGAAGAATTAATCTGTCAGAACATGTGGAATTAGAAGAAGCTGTTCCAATGTTAATCACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTGTTTGGAGAAATCAAACGTTATTCAGTTGACCATGATGCCACAATTATTGAAGAAGAT
GGCACTGAAGTCCGGATTGTTCCTCTTGATGTTCAATATCAATCAGCAGGGGTCTTCCATAAGATGTTGACGAATTTCGG
TGGTCCTTTGAATAACTTTATTCTAGGACTTGTCGCTTTTATCGTTTTAACTTTTATTCAAGGAGGCGTTCCATCAAATT
CTAATGCTATTGGGCAAGTAGAAAAAGGAACACCAGCCTACACCGCAGGCTTGAAATCTGGAGATAAAATTCAAGCTGTC
AATGGAACTAAAACAGCAGATTGGGATAAATTGGTCACAGAAATTTCAAGTTCTAATGGAAAAGAATTAAAACTTGAAAT
TATCCGCTCAGGCAAATCAGAAACTTTGGCAGTTACCCCTAAAAAGATGGACGGCAGTTATCGTGTTGGAATCATGCAAT
CTATGAAAACAGGCTTCTTTGATAAAATTACAGGTGGTTTTGTTCAAGCAGGACAAGCGACCACAGCAATTTTCAGAGCA
TTAGGAAGTCTGATTGCACGACCGAGTCTTGATAAACTGGGTGGGCCAGTTGCCATCTATCAACTCAGCGGACAAGCGGC
AAGAGCAGGTTTGCCAACAATTATTCAGTTGTTAGCTATGCTCTCAATTAACTTAGGAATTGTCAATCTTTTCCCTATTC
CAGTGCTTGACGGTGGAAAAATCGTCTTAAATATTATTGAAGCAATTCGTGGCAAAGCACTTTCGCCTGAGAAAGAATCA
ATTATCACATTAGTCGGAGTTGTCTTCATGCTTGTGCTCTTTATGGCTGTAACATGGAATGACATTCTACGGGCTTTTGT
CAACTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(217-279)

Peptidase family M50 (Peptidase_M50)

(7-413)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A165FD42

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

55.916

100

0.563
  eeP Streptococcus thermophilus LMD-9

55.684

100

0.561