Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QWI19_RS06075 Genome accession   NZ_CP129123
Coordinates   1175569..1175760 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain 6D1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1170569..1180760
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWI19_RS06045 argF 1171434..1172393 (+) 960 WP_153952064.1 ornithine carbamoyltransferase -
  QWI19_RS06050 yjzC 1172479..1172658 (+) 180 WP_003245356.1 YjzC family protein -
  QWI19_RS06055 yjzD 1172704..1172889 (-) 186 WP_003245236.1 YjzD family protein -
  QWI19_RS06060 - 1173138..1173872 (+) 735 WP_003245223.1 hypothetical protein -
  QWI19_RS06065 - 1173954..1174511 (+) 558 WP_015252365.1 hypothetical protein -
  QWI19_RS06070 med 1174601..1175554 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  QWI19_RS06075 comZ 1175569..1175760 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  QWI19_RS06080 yjzB 1175790..1176029 (-) 240 WP_003232972.1 spore coat protein YjzB -
  QWI19_RS06085 fabH 1176194..1177132 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  QWI19_RS06090 fabF 1177155..1178396 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  QWI19_RS06095 yjaZ 1178472..1179257 (+) 786 WP_134982187.1 DUF2268 domain-containing protein -
  QWI19_RS06100 appD 1179449..1180435 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=851188 QWI19_RS06075 WP_003224559.1 1175569..1175760(+) (comZ) [Bacillus subtilis strain 6D1]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=851188 QWI19_RS06075 WP_003224559.1 1175569..1175760(+) (comZ) [Bacillus subtilis strain 6D1]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1