Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   QWI19_RS06070 Genome accession   NZ_CP129123
Coordinates   1174601..1175554 (+) Length   317 a.a.
NCBI ID   WP_014476425.1    Uniprot ID   A0A0K6M9I2
Organism   Bacillus subtilis strain 6D1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1169601..1180554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWI19_RS06045 argF 1171434..1172393 (+) 960 WP_153952064.1 ornithine carbamoyltransferase -
  QWI19_RS06050 yjzC 1172479..1172658 (+) 180 WP_003245356.1 YjzC family protein -
  QWI19_RS06055 yjzD 1172704..1172889 (-) 186 WP_003245236.1 YjzD family protein -
  QWI19_RS06060 - 1173138..1173872 (+) 735 WP_003245223.1 hypothetical protein -
  QWI19_RS06065 - 1173954..1174511 (+) 558 WP_015252365.1 hypothetical protein -
  QWI19_RS06070 med 1174601..1175554 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  QWI19_RS06075 comZ 1175569..1175760 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  QWI19_RS06080 yjzB 1175790..1176029 (-) 240 WP_003232972.1 spore coat protein YjzB -
  QWI19_RS06085 fabH 1176194..1177132 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  QWI19_RS06090 fabF 1177155..1178396 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  QWI19_RS06095 yjaZ 1178472..1179257 (+) 786 WP_134982187.1 DUF2268 domain-containing protein -
  QWI19_RS06100 appD 1179449..1180435 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35310.84 Da        Isoelectric Point: 4.6031

>NTDB_id=851187 QWI19_RS06070 WP_014476425.1 1174601..1175554(+) (med) [Bacillus subtilis strain 6D1]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=851187 QWI19_RS06070 WP_014476425.1 1174601..1175554(+) (med) [Bacillus subtilis strain 6D1]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0K6M9I2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.685

100

0.997