Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LLUC320_RS11125 Genome accession   NZ_CP129095
Coordinates   2168277..2169563 (-) Length   428 a.a.
NCBI ID   WP_081196895.1    Uniprot ID   -
Organism   Lactococcus cremoris strain UC320     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2163277..2174563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLUC320_RS11105 - 2163782..2164375 (-) 594 Protein_2160 PolC-type DNA polymerase III N-terminal domain-containing protein -
  LLUC320_RS11110 (LLUC320_11165) - 2164549..2164740 (-) 192 WP_021211222.1 hypothetical protein -
  LLUC320_RS11115 (LLUC320_11170) - 2165010..2166341 (-) 1332 WP_081196894.1 FAD/NAD(P)-binding oxidoreductase -
  LLUC320_RS11120 (LLUC320_11175) - 2166357..2168207 (-) 1851 WP_259763700.1 proline--tRNA ligase -
  LLUC320_RS11125 (LLUC320_11180) eeP 2168277..2169563 (-) 1287 WP_081196895.1 RIP metalloprotease RseP Regulator
  LLUC320_RS11130 (LLUC320_11185) - 2169582..2170385 (-) 804 WP_011677190.1 phosphatidate cytidylyltransferase -
  LLUC320_RS11135 (LLUC320_11190) - 2170385..2171119 (-) 735 WP_021164970.1 isoprenyl transferase -
  LLUC320_RS11140 (LLUC320_11195) yajC 2171469..2171801 (-) 333 WP_011677192.1 preprotein translocase subunit YajC -
  LLUC320_RS11145 (LLUC320_11200) - 2171896..2172594 (-) 699 Protein_2168 DNA alkylation repair protein -
  LLUC320_RS11150 (LLUC320_11205) rlmH 2172612..2173091 (-) 480 WP_021164969.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46473.07 Da        Isoelectric Point: 6.5140

>NTDB_id=850852 LLUC320_RS11125 WP_081196895.1 2168277..2169563(-) (eeP) [Lactococcus cremoris strain UC320]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEAVNSGDENSVSNIVRRINLSEHVELEEAVPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIVPLDVQYQSAGVFHKMLTNFGGPLNNFILGLVAFIVLTFIQGGVPSNSNAIGQVEKGTPAYTAGLKSGDKIQAV
NGTKTADWDKLVTEISSSNGKELKLEIIRSGKSETLAVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQATTAIFRA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIIQLLAMLSINLGIVNLFPIPMLDGGKIVLNIIEAIRGKALSPEKES
IITLVGVVFMLVLFMAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=850852 LLUC320_RS11125 WP_081196895.1 2168277..2169563(-) (eeP) [Lactococcus cremoris strain UC320]
TTGATAGAAACTCTGATTACTTTTATTATTATTTTTGGTATTATTGTCGCTATTCATGAATATGGTCACCTTTGGTGGGC
AAAACGTTCTGGAATTCTAGTGCGTGAATATGCCGTAGGAATGGGGCCGAAGATTTTTGCTCATCAAGCAAAAGATGGAA
CGCTCTACACGATTCGAATTTTACCGCTTGGTGGCTATGTTCGTTTGGCCGGCTGGGGTGATGATAAAACTGAAATAAAA
AAAGGACAAGCTGCAAGTCTGGTTGTCAGTAAATCTGAAGCAGTAAATTCAGGAGATGAAAATTCTGTCAGTAATATTGT
CAGAAGAATTAATCTGTCAGAACATGTGGAATTAGAAGAAGCTGTTCCAATGTTAATCACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTGTTTGGAGAAATCAAACGTTATTCAGTTGACCATGATGCCACAATTATTGAAGAAGAT
GGCACTGAAGTCCGGATTGTTCCTCTTGATGTTCAATATCAATCAGCAGGGGTCTTCCATAAGATGTTGACGAATTTCGG
TGGTCCTTTGAATAACTTTATTCTAGGACTTGTCGCTTTTATCGTTTTAACTTTTATTCAAGGAGGCGTTCCATCAAATT
CTAATGCTATTGGGCAAGTAGAAAAAGGAACACCAGCCTACACCGCAGGCTTGAAATCTGGAGATAAAATTCAAGCTGTC
AATGGAACTAAAACAGCAGATTGGGATAAATTGGTCACAGAAATTTCAAGTTCTAATGGAAAAGAATTAAAACTTGAAAT
TATCCGCTCAGGCAAATCAGAAACTTTGGCAGTTACCCCTAAAAAGATGGATGGCAGTTATCGTGTTGGAATCATGCAAT
CTATGAAAACAGGCTTCTTTGATAAAATTACAGGTGGTTTTGTTCAAGCAGGACAAGCGACCACAGCAATTTTCAGAGCA
TTAGGAAGTCTGATTGCACGACCGAGTCTTGATAAACTGGGTGGGCCAGTTGCCATCTATCAACTCAGCGGACAAGCGGC
AAGAGCAGGTTTGCCAACAATTATTCAGTTGTTAGCTATGCTCTCGATTAACTTAGGAATTGTCAATCTTTTCCCTATTC
CAATGCTTGACGGTGGAAAAATCGTCTTAAATATTATTGAAGCAATTCGTGGCAAAGCACTTTCGCCTGAGAAAGAATCA
ATTATCACATTAGTCGGAGTTGTCTTCATGCTTGTGCTCTTTATGGCTGTAACATGGAATGACATTCTACGGGCTTTTGT
CAACTAA

Domains


Predicted by InterproScan.

(217-279)

(7-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

55.916

100

0.563

  eeP Streptococcus thermophilus LMD-9

55.684

100

0.561