Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   QU662_RS02700 Genome accession   NZ_CP128651
Coordinates   542542..543126 (-) Length   194 a.a.
NCBI ID   WP_011276196.1    Uniprot ID   A0A2A1KAP4
Organism   Staphylococcus haemolyticus strain F0718     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 537542..548126
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QU662_RS02660 (QU662_02660) - 538306..538908 (-) 603 WP_011276203.1 CPBP family glutamic-type intramembrane protease -
  QU662_RS02665 (QU662_02665) - 538925..539101 (-) 177 WP_011276202.1 DUF2187 family protein -
  QU662_RS02670 (QU662_02670) - 539302..540291 (+) 990 WP_016931368.1 lipoate--protein ligase -
  QU662_RS02675 (QU662_02675) - 540339..540440 (-) 102 WP_076684686.1 Ltp family lipoprotein -
  QU662_RS02680 (QU662_02680) - 540510..541085 (-) 576 WP_011276200.1 hypothetical protein -
  QU662_RS02685 (QU662_02685) - 541156..541629 (-) 474 WP_016931369.1 PH domain-containing protein -
  QU662_RS02700 (QU662_02700) comK/comK1 542542..543126 (-) 585 WP_011276196.1 competence protein ComK Regulator
  QU662_RS02705 (QU662_02705) - 543340..543558 (+) 219 WP_011276195.1 IDEAL domain-containing protein -
  QU662_RS02710 (QU662_02710) - 543635..543736 (-) 102 WP_011276194.1 SAR1012 family small protein -
  QU662_RS02715 (QU662_02715) - 543815..544045 (-) 231 WP_016931370.1 TM2 domain-containing protein -
  QU662_RS02720 (QU662_02720) - 544232..544786 (+) 555 WP_016931371.1 GNAT family N-acetyltransferase -
  QU662_RS02725 (QU662_02725) - 544885..545823 (-) 939 WP_016931372.1 1,4-dihydroxy-2-naphthoate polyprenyltransferase -
  QU662_RS02730 (QU662_02730) - 546003..547370 (+) 1368 WP_016931373.1 isochorismate synthase -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 23002.43 Da        Isoelectric Point: 9.2942

>NTDB_id=849490 QU662_RS02700 WP_011276196.1 542542..543126(-) (comK/comK1) [Staphylococcus haemolyticus strain F0718]
MTNISQSQNTVYIIRKGDMIIKPVIDDYEQTKGSEIWKYDSTIVSSPFKTQKIVERSCKFYGNSYISKKSETQRIAGITS
KPPILLTPLFPTYFFPTHSDRLEENMWINMHYVHEIKPLKNRKCKIIFANHQTLTLNVSYHSIWHQYSNCIFYYYMVDKQ
SRMKSNNPEMPIDYEKTTLNIFEALSHYSLLQDK

Nucleotide


Download         Length: 585 bp        

>NTDB_id=849490 QU662_RS02700 WP_011276196.1 542542..543126(-) (comK/comK1) [Staphylococcus haemolyticus strain F0718]
ATGACAAATATTTCTCAAAGCCAAAATACTGTATATATTATTCGAAAAGGAGATATGATAATCAAACCCGTCATTGATGA
TTATGAGCAAACAAAAGGATCAGAAATATGGAAATATGATTCCACAATAGTTTCAAGCCCATTCAAAACTCAAAAAATCG
TCGAACGCTCATGTAAATTTTATGGTAATAGCTATATTAGTAAGAAATCCGAAACACAACGAATTGCCGGCATTACTAGT
AAACCACCTATTTTATTGACTCCTCTCTTCCCCACTTATTTTTTCCCTACGCATTCAGACCGTTTAGAAGAAAACATGTG
GATTAATATGCATTATGTACATGAAATTAAACCTCTTAAAAATCGAAAATGTAAAATTATTTTTGCAAATCATCAAACAT
TAACACTTAATGTTTCCTACCACAGTATTTGGCACCAATACTCTAACTGCATTTTTTATTATTACATGGTCGATAAACAA
TCTCGTATGAAGTCAAACAATCCAGAAATGCCAATAGATTATGAGAAAACGACTTTAAATATTTTCGAAGCACTTTCACA
TTATTCACTATTACAAGATAAATAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(11-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A1KAP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

68.617

96.907

0.665
  comK/comK1 Staphylococcus aureus N315

68.617

96.907

0.665