NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	QRA04_RS21460	Genome accession	NZ_CP128608
Coordinates	4169938..4172538 (-)	Length	866 a.a.
NCBI ID	WP_226639996.1	Uniprot ID	-
Organism	Bacillus tropicus strain PUMB_55
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4164938..4177538

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRA04_RS21430 (QRA04_21400)	fabF	4165083..4166321 (-)	1239	WP_000412651.1	beta-ketoacyl-ACP synthase II	-
QRA04_RS21435 (QRA04_21405)	fabH	4166353..4167285 (-)	933	WP_001100541.1	beta-ketoacyl-ACP synthase III	-
QRA04_RS21440 (QRA04_21410)	comZ	4167695..4167871 (-)	177	WP_009879752.1	ComZ family protein	Regulator
QRA04_RS21445 (QRA04_21415)	-	4167925..4168797 (-)	873	WP_000486163.1	NAD-dependent epimerase/dehydratase family protein	-
QRA04_RS21450 (QRA04_21420)	-	4168827..4169561 (-)	735	WP_000028705.1	hypothetical protein	-
QRA04_RS21455 (QRA04_21425)	-	4169718..4169900 (+)	183	WP_001211116.1	YjzD family protein	-
QRA04_RS21460 (QRA04_21430)	clpC	4169938..4172538 (-)	2601	WP_226639996.1	ATP-dependent chaperone ClpB	Regulator
QRA04_RS21465 (QRA04_21435)	-	4172749..4172928 (-)	180	WP_000531421.1	YjzC family protein	-
QRA04_RS21470 (QRA04_21440)	-	4173419..4174228 (+)	810	WP_001041235.1	Cof-type HAD-IIB family hydrolase	-
QRA04_RS21475 (QRA04_21445)	-	4174334..4174474 (+)	141	WP_000516816.1	hypothetical protein	-
QRA04_RS21480 (QRA04_21450)	-	4174475..4174672 (+)	198	WP_000527392.1	DUF3813 domain-containing protein	-
QRA04_RS21485 (QRA04_21455)	-	4174698..4175555 (-)	858	WP_000364426.1	YitT family protein	-
QRA04_RS21490 (QRA04_21460)	-	4175656..4175787 (+)	132	WP_001120845.1	DUF3941 domain-containing protein	-
QRA04_RS21495 (QRA04_21465)	prsA	4175917..4176774 (+)	858	WP_226639995.1	peptidylprolyl isomerase PrsA	-

Sequence

Protein

Download Length: 866 a.a. Molecular weight: 97568.55 Da Isoelectric Point: 5.0856

                                >NTDB_id=849298 QRA04_RS21460 WP_226639996.1 4169938..4172538(-) (clpC) [Bacillus tropicus strain PUMB_55]

MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGAENLIKKKPSVTGSGAE

AGKLYITGALQQLLVRAGKEAEKLQDDYISIEHVLLAFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQRVTSQNPEAT

YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI

FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD

EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA

CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE

HLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG

EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM

SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI

IMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT

VELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVYVK

Nucleotide

Download Length: 2601 bp

                                >NTDB_id=849298 QRA04_RS21460 WP_226639996.1 4169938..4172538(-) (clpC) [Bacillus tropicus strain PUMB_55]

ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCATCA

AGAAGTAGATACTGTTCATCTCTTGTTTACATTATTAGAAGAGCAAGATGGGTTAGCAGTACGTATTTTTCAAAAAATGA

ATGTCGATATAGAAGCGTTAAAACAAGGCGCCGAAAATTTAATTAAGAAAAAGCCTTCCGTAACGGGAAGCGGTGCAGAA

GCAGGTAAATTATATATAACAGGTGCTCTGCAACAATTACTTGTAAGAGCGGGAAAAGAAGCAGAGAAATTGCAAGATGA

CTACATTTCAATTGAACATGTATTGCTTGCTTTTACTGAAGAAAAAGGCGATATAAATCAATTATTTACAAGATTTCATA

TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT

TATGAAGCGTTAGAAAAATATGGTCGTGATTTAGTGGCGGAAGTAAGAGCGGGGAAAATTGACCCTGTTATTGGCCGCGA

TAGTGAAATTCGCCGCGTAATCCGTATTCTTTCACGTAAAACGAAAAACAACCCGGTTTTAATTGGGGAACCAGGTGTAG

GTAAAACAGCAATCGTTGAAGGATTAGCACAGCGTATTGTGAAAAAGGACGTACCAGAAGGATTAAAAGATAGAACAATT

TTTGCGTTAGATATGAGTGCGCTTGTAGCCGGTGCGAAATTCCGCGGTGAGTTTGAGGAGCGTCTCCAAGCTGTATTAAA

TGAAATTAAAAAGAGTGAAGGTCGTATTTTACTATTCATTGATGAACTTCACACAATCGTCGGCGCTGGTAAAACAGAAG

GCGCAATGGATGCAGGAAATATGTTAAAACCGATGCTTGCGCGTGGTGAACTGCATTGTATCGGGGCGACGACGTTAGAT

GAATATCGTAAATATATTGAGAAAGATCCAGCGCTAGAAAGACGTTTCCAACAAGTCTTAGCAGAAGAACCAACTGTTGA

AGATACAATTTCCATTTTACGTGGTTTAAAAGAGCGCTTTGAAATTTATCACGGTGTAAATATTCATGACCGCGCGATTG

TAGCAGCATCAGTTTTATCAGATCGATATATTTCGGATCGTTTCTTACCGGATAAAGCCATTGATCTTGTTGACGAAGCG

TGCGCAACAATTCGTACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGCTGGAAAT

TGAAGAAGCAGCTCTTGGAAAAGAGAAAGACTTTGGTAGCCAAGAACGTCTAAAAACATTGCAACGTGAATTATCGGATT

TAAAAGAAGTGGCAAGTGGCATGAGAGCCAAATGGGAGAAAGAAAAAGAAGATATTCACAAAGTTCGTGACTTACGTGAA

CATTTAGAGCGTCTGCGCCGTGAATTAGAAGAAGCAGAAGGTAATTACGACTTAAATAGAGCAGCGGAACTTCGCCACGG

AAAAATTCCTGCAATTGAAAAAGAGTTAAAAGAAGCAGAAGAAATGGGCGCGAATAATAAACAAGAAAATCGTTTATTAC

GTGAGGAAGTAAGTGAAGAAGAGATTGCTGATATTGTTTCACGCTGGACTGGTATTCCTGTCGCAAAACTCGTTGAAGGT

GAACGTGAGAAATTATTACGATTAGAGCAAATTTTATCAGAGCGTGTTATCGGACAAGAAGAAGCGGTAAGCCTAGTATC

AGACGCAGTTCTTCGTGCTCGTGCTGGTATTAAAGACCCGAACCGTCCAATTGGTTCCTTCATCTTCTTAGGACCGACTG

GTGTTGGTAAAACAGAACTTGCAAAAACGTTGGCGCAGTCTTTATTTGATAGTGAAGAGCAAATGATTCGTATTGATATG

TCTGAGTACATGGAGAAACACGCTGTGTCACGCTTAATTGGTGCACCTCCTGGATATGTTGGATATGAAGAGGGCGGTCA

ATTAACAGAAGCAGTAAGACGTAAACCGTATTCTGTTATTTTGTTAGATGAAATCGAAAAAGCACATCCAGAAGTATTCA

ACATTTTATTACAAATGTTAGATGACGGACGCATTACAGATTCGCAAGGACGTACAGTAGACTTTAAAAACACAGTTATT

ATTATGACGTCAAATATTGGATCTGCTCATTTATTAGATGGATTAGAAGAAGATGGCTCAATTAAAGAGGAATCAAGAGA

ACTTGTCATGGGGCAATTAAGAGGACATTTCCGACCAGAGTTTTTAAATCGTGTCGACGAAATTATTTTATTCAAACCTC

TTACAACGAATGAAATTAAAGGTATTGTTGATAAAATTGTAAAAGAATTACAAGGCCGTTTAGCTGACCGTCATATTACG

GTAGAATTAACAGACGCAGCGAAAGAGTTTGTTGTCGAAGCTGGCTTCGATCCAATGTACGGAGCTCGTCCGTTAAAACG

ATATGTGCAGCGTCAAGTTGAGACGAAATTAGCGAGAGAATTAATTGCAGGAACGATTACTGACAATAGTCATGTAGTTG

TTGATGTAGAAAATAACGAATTAGTCGTTTATGTGAAGTAA