Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QRA04_RS21440 Genome accession   NZ_CP128608
Coordinates   4167695..4167871 (-) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus tropicus strain PUMB_55     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4162695..4172871
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA04_RS21420 (QRA04_21390) - 4163298..4164044 (-) 747 WP_029437838.1 YjbA family protein -
  QRA04_RS21425 (QRA04_21395) - 4164188..4164976 (-) 789 WP_000539322.1 DUF2268 domain-containing protein -
  QRA04_RS21430 (QRA04_21400) fabF 4165083..4166321 (-) 1239 WP_000412651.1 beta-ketoacyl-ACP synthase II -
  QRA04_RS21435 (QRA04_21405) fabH 4166353..4167285 (-) 933 WP_001100541.1 beta-ketoacyl-ACP synthase III -
  QRA04_RS21440 (QRA04_21410) comZ 4167695..4167871 (-) 177 WP_009879752.1 ComZ family protein Regulator
  QRA04_RS21445 (QRA04_21415) - 4167925..4168797 (-) 873 WP_000486163.1 NAD-dependent epimerase/dehydratase family protein -
  QRA04_RS21450 (QRA04_21420) - 4168827..4169561 (-) 735 WP_000028705.1 hypothetical protein -
  QRA04_RS21455 (QRA04_21425) - 4169718..4169900 (+) 183 WP_001211116.1 YjzD family protein -
  QRA04_RS21460 (QRA04_21430) clpC 4169938..4172538 (-) 2601 WP_226639996.1 ATP-dependent chaperone ClpB Regulator

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=849297 QRA04_RS21440 WP_009879752.1 4167695..4167871(-) (comZ) [Bacillus tropicus strain PUMB_55]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=849297 QRA04_RS21440 WP_009879752.1 4167695..4167871(-) (comZ) [Bacillus tropicus strain PUMB_55]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGAA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586