Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QRA04_RS06545 Genome accession   NZ_CP128608
Coordinates   1240022..1240816 (+) Length   264 a.a.
NCBI ID   WP_033686380.1    Uniprot ID   A0A4Y6EYG5
Organism   Bacillus tropicus strain PUMB_55     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1235022..1245816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA04_RS06530 (QRA04_06515) argR 1235861..1236310 (+) 450 WP_001032581.1 arginine repressor ArgR -
  QRA04_RS06535 (QRA04_06520) recN 1236578..1238317 (+) 1740 WP_000947747.1 DNA repair protein RecN Machinery gene
  QRA04_RS06540 (QRA04_06525) spoIVB 1238436..1239734 (+) 1299 WP_226640705.1 SpoIVB peptidase -
  QRA04_RS06545 (QRA04_06530) spo0A 1240022..1240816 (+) 795 WP_033686380.1 sporulation transcription factor Spo0A Regulator
  QRA04_RS06550 (QRA04_06535) - 1241112..1242635 (+) 1524 WP_410490780.1 hypothetical protein -
  QRA04_RS06555 (QRA04_06540) - 1243004..1244422 (+) 1419 WP_226640707.1 hypothetical protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4718

>NTDB_id=849282 QRA04_RS06545 WP_033686380.1 1240022..1240816(+) (spo0A) [Bacillus tropicus strain PUMB_55]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=849282 QRA04_RS06545 WP_033686380.1 1240022..1240816(+) (spo0A) [Bacillus tropicus strain PUMB_55]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGTTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TTTTAGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGTCAAGAAGATGTGACGAAAAAAGCGGTTGACTTAGGTGCTTCCTATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCAAACGCTACCATTAAACGTCCAC
TTCCATCTTTCCGTTCAGCAACGACAATAGATGGAAAGCCGAAAAATTTAGATGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGATATATGTATTTAAGAGAAGCAATCTCTATGGTGTACAACGATATCGAATTACT
TGGATCTATTACAAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGTGTTGAGCGTGCAATCC
GTCACGCGATTGAAGTAGCATGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCCGAGTTCATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Y6EYG5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818