Detailed information NTG0849015

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QTL84_RS18200
• Genome accession: NZ_CP128559
• Coordinates: 3631219..3632382 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain SH-1471
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3626219..3637382

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QTL84_RS18170	-	3626484..3626903 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
QTL84_RS18175	comFC	3626977..3627666 (-)	690	WP_197535984.1	ComF family protein	Machinery gene
QTL84_RS18180	-	3627672..3627956 (-)	285	WP_014419011.1	competence protein ComFB	-
QTL84_RS18185	comFA	3628014..3629399 (-)	1386	WP_014419012.1	DEAD/DEAH box helicase	Machinery gene
QTL84_RS18190	-	3629507..3630355 (-)	849	WP_003151387.1	DegV family protein	-
QTL84_RS18195	degU	3630453..3631142 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
QTL84_RS18200	degS	3631219..3632382 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
QTL84_RS18205	-	3632605..3633252 (+)	648	WP_007614107.1	YigZ family protein	-
QTL84_RS18210	-	3633257..3634471 (+)	1215	WP_014419013.1	LCP family protein	-
QTL84_RS18215	-	3634561..3635637 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
QTL84_RS18220	-	3635770..3636966 (-)	1197	WP_014419014.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=849015 QTL84_RS18200 WP_007407484.1 3631219..3632382(-) (degS) [Bacillus velezensis strain SH-1471]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=849015 QTL84_RS18200 WP_007407484.1 3631219..3632382(-) (degS) [Bacillus velezensis strain SH-1471]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTAGGTCTTCAGGAAATCATTGAAC
GGTCAGAATCGTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCTGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951