Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   QTL84_RS16225 Genome accession   NZ_CP128559
Coordinates   3214904..3217255 (-) Length   783 a.a.
NCBI ID   WP_269800792.1    Uniprot ID   -
Organism   Bacillus velezensis strain SH-1471     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3209904..3222255
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTL84_RS16185 - 3210364..3210795 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  QTL84_RS16190 - 3210795..3211136 (+) 342 WP_014418758.1 Na(+)/H(+) antiporter subunit C -
  QTL84_RS16195 - 3211129..3212610 (+) 1482 WP_032863920.1 Na+/H+ antiporter subunit D -
  QTL84_RS16200 - 3212616..3213092 (+) 477 WP_014418760.1 Na+/H+ antiporter subunit E -
  QTL84_RS16205 - 3213092..3213376 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  QTL84_RS16210 mnhG 3213360..3213734 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  QTL84_RS16215 - 3213774..3214157 (-) 384 WP_014418761.1 hotdog fold thioesterase -
  QTL84_RS16220 comA 3214179..3214823 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  QTL84_RS16225 comP 3214904..3217255 (-) 2352 WP_269800792.1 histidine kinase Regulator
  QTL84_RS16230 comX 3217233..3217403 (-) 171 WP_032863917.1 competence pheromone ComX -
  QTL84_RS16235 - 3217403..3218329 (-) 927 WP_014721741.1 polyprenyl synthetase family protein -
  QTL84_RS16240 degQ 3218460..3218600 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  QTL84_RS16245 - 3219066..3219407 (+) 342 WP_014418765.1 hypothetical protein -
  QTL84_RS16250 - 3219414..3220637 (-) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -
  QTL84_RS16255 - 3220767..3222233 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -

Sequence

Protein


Download         Length: 783 a.a.        Molecular weight: 90764.00 Da        Isoelectric Point: 9.0674

>NTDB_id=849008 QTL84_RS16225 WP_269800792.1 3214904..3217255(-) (comP) [Bacillus velezensis strain SH-1471]
MTQLGLLKKQESCGSLRQLLKCFTVALLLFGIFYFTFIIYYTQNGILIGTKVVQSSNQELKVVDISKSSYGRIMGLKIGD
RITEINGGKPKKENIYGSYLAKIKYLKVERDGRLIELKNIEFIYLDSPYSFFSYIIPCIFFLLSLICIFYIFKVNLRKDS
VSAYILICFLLCISIAYLSAGGVTRGYRINRYINLYTFLAVPVLYLNFLHQYFKELKVKFSRGIYVGLLYLLPLINILLE
LFRDRIGHHLIVSLNLLTFLLEMIVVYVSLILYQIKHRKKDFSYLLKVLLVSNTIAFLPFSLLYIAPLIIFGQYVYSAVV
TAPFLLLIPLALVYQFVVNKIYNIDFLLGRLRYYCLLAVIPTIGIVWVFVVFINKNKNFDTFQITLFVFLIMLAVFYFKE
VLDFKFRLKRFSEKYNYQDSIFKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWQPY
KKEFDKVTSEIGKIIEVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQD
LKQQGSNPVWLKKLMFTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMT
RETCHELRPQLLYDLGLVKAVSKLTAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLI
SIQNKVILHYEDDGVGCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2352 bp        

>NTDB_id=849008 QTL84_RS16225 WP_269800792.1 3214904..3217255(-) (comP) [Bacillus velezensis strain SH-1471]
ATGACCCAGCTTGGTTTACTTAAAAAACAAGAGAGTTGTGGTTCCTTGAGACAATTGCTGAAATGTTTTACGGTTGCTTT
ATTATTGTTCGGAATTTTTTATTTTACTTTTATAATTTATTATACTCAGAATGGAATATTAATAGGAACAAAAGTAGTTC
AGTCTTCTAACCAAGAATTAAAAGTTGTGGATATTTCAAAATCTTCTTATGGAAGAATAATGGGTCTAAAAATTGGGGAC
AGAATTACTGAAATAAATGGCGGAAAACCTAAAAAAGAAAATATTTATGGTTCATACCTTGCGAAAATTAAGTATTTAAA
AGTTGAGAGAGACGGGCGTTTAATAGAACTTAAAAATATTGAATTCATTTATTTAGATAGTCCATATAGTTTCTTTTCGT
ATATTATTCCGTGTATCTTTTTTCTTCTTAGTTTAATATGCATATTTTATATATTTAAAGTCAACCTAAGAAAAGATAGC
GTCTCAGCGTATATTCTTATTTGCTTTTTACTGTGTATTTCTATTGCATACTTAAGCGCAGGAGGGGTTACAAGAGGTTA
TCGTATTAATAGGTACATTAATCTTTACACCTTTTTAGCTGTGCCTGTTTTATATCTAAATTTCTTGCATCAATATTTCA
AAGAACTTAAAGTGAAATTTTCGAGAGGAATTTACGTTGGTTTATTGTACCTTCTTCCTCTAATTAATATCCTGCTTGAA
TTATTTAGAGATAGAATAGGTCATCATTTAATTGTAAGCCTTAACCTTTTAACATTTTTATTAGAAATGATTGTAGTTTA
TGTTAGTCTCATATTATATCAAATAAAACATAGAAAAAAGGATTTCTCTTACCTGTTAAAAGTACTTCTGGTTTCTAATA
CAATTGCTTTTTTACCCTTTTCTTTATTATATATTGCTCCATTGATTATTTTTGGACAATATGTATATAGCGCTGTAGTT
ACTGCACCTTTTCTTCTGCTCATACCTTTAGCATTGGTATATCAATTTGTCGTAAATAAGATTTACAACATTGATTTCTT
GTTAGGCCGTTTGAGGTATTATTGCTTGTTAGCAGTTATTCCGACGATAGGAATCGTTTGGGTATTTGTAGTATTCATCA
ACAAAAATAAAAATTTTGACACTTTCCAAATTACATTGTTTGTATTTCTAATCATGCTAGCCGTTTTTTATTTCAAAGAA
GTTCTAGACTTTAAGTTTCGCTTAAAGCGTTTCTCTGAAAAATACAATTACCAAGACAGCATATTTAAATATACACAGCT
TCTTAAAAGCGTATCAGCTTTAAATCAAGTGTTTATGAATTTGAAAAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAG
CTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTATTTTGATAAACAGAACAGTGAACCGAACTGGCAGCCGTAT
AAAAAAGAATTTGATAAAGTCACATCAGAGATTGGCAAGATTATTGAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGA
AAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAATACTCCAAGACTGACAAGAGATGAGATATCTTGGT
TAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATATTGCAGATCGAAGAACTCATGAACCATTTACAAGAT
CTAAAGCAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGC
CCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGA
AAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGTCGGATGTCATTTTGATGACC
CGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCGGTGTCCAAGCTTACCGCACA
GCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCTGGATTTGGATACACAGCTGA
ATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCACAGGCGAATGAGGTGCTGATTATGCTGATC
AGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGATGCAATCAGGAAGAAGGCGGCGGGCAGTCGAT
GAGCATGGGTCTTTCGGGTATTAAGGAGCGTGTCCGGGCGCTTGACGGACGGATGAAAATCGACACAAGTGAAGGAAACG
GTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(583-652)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

61.219

98.467

0.603