Detailed information NTG0848822

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: QTN52_RS01940
• Genome accession: NZ_CP128551
• Coordinates: 388168..389316 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM123441
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 383168..394316

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QTN52_RS01920 (QTN52_01920)	-	383568..384251 (-)	684	WP_014416899.1	ABC transporter ATP-binding protein	-
QTN52_RS01925 (QTN52_01925)	-	384266..385699 (-)	1434	WP_134986377.1	ABC transporter permease	-
QTN52_RS01930 (QTN52_01930)	-	385912..386595 (+)	684	WP_014416901.1	response regulator transcription factor	-
QTN52_RS01935 (QTN52_01935)	-	386582..388015 (+)	1434	WP_134986378.1	HAMP domain-containing sensor histidine kinase	-
QTN52_RS01940 (QTN52_01940)	rapC	388168..389316 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
QTN52_RS01945 (QTN52_01945)	phrC	389300..389419 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
QTN52_RS01950 (QTN52_01950)	-	389569..389664 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
QTN52_RS01955 (QTN52_01955)	-	389759..391123 (-)	1365	WP_053285479.1	aspartate kinase	-
QTN52_RS01960 (QTN52_01960)	ceuB	391536..392489 (+)	954	WP_014416904.1	ABC transporter permease	Machinery gene
QTN52_RS01965 (QTN52_01965)	-	392479..393426 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
QTN52_RS01970 (QTN52_01970)	-	393420..394178 (+)	759	WP_012116804.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=848822 QTN52_RS01940 WP_003156336.1 388168..389316(+) (rapC) [Bacillus velezensis strain SRCM123441]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=848822 QTN52_RS01940 WP_003156336.1 388168..389316(+) (rapC) [Bacillus velezensis strain SRCM123441]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACGTATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGACGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568