Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   QTN52_RS01745 Genome accession   NZ_CP128551
Coordinates   329925..330323 (-) Length   132 a.a.
NCBI ID   WP_014416873.1    Uniprot ID   I2C179
Organism   Bacillus velezensis strain SRCM123441     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 324925..335323
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN52_RS01720 (QTN52_01720) - 325098..326300 (+) 1203 WP_014416870.1 GTP-binding protein -
  QTN52_RS01725 (QTN52_01725) - 326365..327501 (+) 1137 WP_007609290.1 zinc-dependent alcohol dehydrogenase -
  QTN52_RS01730 (QTN52_01730) - 327515..327949 (+) 435 WP_061861834.1 RDD family protein -
  QTN52_RS01735 (QTN52_01735) - 328021..328344 (+) 324 WP_007409357.1 YckD family protein -
  QTN52_RS01740 (QTN52_01740) - 328448..329884 (+) 1437 WP_134986369.1 family 1 glycosylhydrolase -
  QTN52_RS01745 (QTN52_01745) nin/comJ 329925..330323 (-) 399 WP_014416873.1 competence protein ComJ Regulator
  QTN52_RS01750 (QTN52_01750) nucA/comI 330344..330781 (-) 438 WP_289616906.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  QTN52_RS01755 (QTN52_01755) hxlB 331112..331669 (-) 558 WP_134986370.1 6-phospho-3-hexuloisomerase -
  QTN52_RS01760 (QTN52_01760) hxlA 331666..332301 (-) 636 WP_015239130.1 3-hexulose-6-phosphate synthase -
  QTN52_RS01765 (QTN52_01765) - 332533..332895 (+) 363 WP_007409352.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14893.89 Da        Isoelectric Point: 4.7846

>NTDB_id=848819 QTN52_RS01745 WP_014416873.1 329925..330323(-) (nin/comJ) [Bacillus velezensis strain SRCM123441]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLSFNIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=848819 QTN52_RS01745 WP_014416873.1 329925..330323(-) (nin/comJ) [Bacillus velezensis strain SRCM123441]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTCTTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C179

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.515

100

0.765