Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   QTN48_RS20105 Genome accession   NZ_CP128503
Coordinates   3915416..3915814 (+) Length   132 a.a.
NCBI ID   WP_017419379.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM123422     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3910416..3920814
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN48_RS20085 (QTN48_20085) - 3912844..3913206 (-) 363 WP_007409352.1 helix-turn-helix domain-containing protein -
  QTN48_RS20090 (QTN48_20090) hxlA 3913438..3914073 (+) 636 WP_123117601.1 3-hexulose-6-phosphate synthase -
  QTN48_RS20095 (QTN48_20095) hxlB 3914070..3914627 (+) 558 WP_014416874.1 6-phospho-3-hexuloisomerase -
  QTN48_RS20100 (QTN48_20100) nucA/comI 3914958..3915395 (+) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  QTN48_RS20105 (QTN48_20105) nin/comJ 3915416..3915814 (+) 399 WP_017419379.1 competence protein ComJ Regulator
  QTN48_RS20110 (QTN48_20110) - 3915855..3917291 (-) 1437 WP_104843069.1 family 1 glycosylhydrolase -
  QTN48_RS20115 (QTN48_20115) - 3917395..3917718 (-) 324 WP_007409357.1 YckD family protein -
  QTN48_RS20120 (QTN48_20120) - 3917790..3918224 (-) 435 WP_014416871.1 RDD family protein -
  QTN48_RS20125 (QTN48_20125) - 3918239..3919375 (-) 1137 WP_007609290.1 zinc-dependent alcohol dehydrogenase -
  QTN48_RS20130 (QTN48_20130) - 3919440..3920642 (-) 1203 WP_014416870.1 GTP-binding protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14893.89 Da        Isoelectric Point: 4.7846

>NTDB_id=847958 QTN48_RS20105 WP_017419379.1 3915416..3915814(+) (nin/comJ) [Bacillus velezensis strain SRCM123422]
MIKSWKPQELAISYHQFTLFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLSFNIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=847958 QTN48_RS20105 WP_017419379.1 3915416..3915814(+) (nin/comJ) [Bacillus velezensis strain SRCM123422]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACACTCTTTCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTCTTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.515

100

0.765