Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   QTN46_RS16410 Genome accession   NZ_CP128501
Coordinates   3011068..3013374 (-) Length   768 a.a.
NCBI ID   WP_289393861.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain SRCM123386     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3006068..3018374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN46_RS16370 (QTN46_16370) - 3006528..3006959 (+) 432 WP_013353387.1 Na(+)/H(+) antiporter subunit B -
  QTN46_RS16375 (QTN46_16375) - 3006959..3007300 (+) 342 WP_013353388.1 Na(+)/H(+) antiporter subunit C -
  QTN46_RS16380 (QTN46_16380) - 3007293..3008774 (+) 1482 WP_013353389.1 Na+/H+ antiporter subunit D -
  QTN46_RS16385 (QTN46_16385) - 3008780..3009256 (+) 477 WP_013353390.1 Na+/H+ antiporter subunit E -
  QTN46_RS16390 (QTN46_16390) - 3009256..3009540 (+) 285 WP_013353391.1 Na(+)/H(+) antiporter subunit F1 -
  QTN46_RS16395 (QTN46_16395) mnhG 3009524..3009898 (+) 375 WP_013353392.1 monovalent cation/H(+) antiporter subunit G -
  QTN46_RS16400 (QTN46_16400) - 3009938..3010321 (-) 384 WP_013353393.1 hotdog fold thioesterase -
  QTN46_RS16405 (QTN46_16405) comA 3010343..3010987 (-) 645 WP_014472195.1 response regulator transcription factor Regulator
  QTN46_RS16410 (QTN46_16410) comP 3011068..3013374 (-) 2307 WP_289393861.1 histidine kinase Regulator
  QTN46_RS16415 (QTN46_16415) comX 3013397..3013573 (-) 177 WP_013353396.1 competence pheromone ComX -
  QTN46_RS16420 (QTN46_16420) - 3013592..3014467 (-) 876 WP_013353397.1 polyprenyl synthetase family protein -
  QTN46_RS16425 (QTN46_16425) degQ 3014619..3014759 (-) 141 WP_013353398.1 degradation enzyme regulation protein DegQ Regulator
  QTN46_RS16430 (QTN46_16430) - 3015224..3015565 (+) 342 WP_013353399.1 hypothetical protein -
  QTN46_RS16435 (QTN46_16435) - 3015572..3016795 (-) 1224 WP_013353400.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 768 a.a.        Molecular weight: 89636.89 Da        Isoelectric Point: 8.2960

>NTDB_id=847867 QTN46_RS16410 WP_289393861.1 3011068..3013374(-) (comP) [Bacillus amyloliquefaciens strain SRCM123386]
MRYFIKHLSIALLIFSFFYIAHIIYFTQNGILVGTYVVETSKHEFEVVKITKSSYGRYLNLKEEDKILQINGHMPSSQNI
KNGYLAKANNLKVERRNHEIQLHGSEDLSLNSSVSFFIYIVPCILFALSLLCIFYIYKVNRIKNTVSAYILICFLIFISI
AYLSAGGVTRGYEINRYVNLFTFLNVPVLYLHFLYQYFKELKIKFSAKSIVYILYCLPVLNIVTELFRYRYDLYFVRDMN
LLSFFIEILIVYMYIVYYAIIYRKRDHAYLLKVLLISNTIAFLPFTVLYLLSEVILGQYIYSAIVTAPFLLIIPLALVYQ
FVVNKIYDIDFLLGRIRYYSFLSIVPTIGVVWLSILYESKGNHFNTIQITLYVFLIFLAVFYTKEVLDYKFRLKRFSEKY
NYQDSIYKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEISSDGDILYFDKQNIEPNWQPYKKEFDKVTSEIGKII
EVNQGFLMKIGERGANSYILLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGV
GCNQEEGSGQAMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=847867 QTN46_RS16410 WP_289393861.1 3011068..3013374(-) (comP) [Bacillus amyloliquefaciens strain SRCM123386]
TTGAGGTATTTTATTAAGCATCTTTCAATCGCACTGTTGATATTTAGTTTTTTCTATATTGCACATATTATATACTTTAC
CCAGAATGGAATTTTAGTCGGAACCTATGTTGTTGAAACATCAAAACATGAGTTTGAAGTTGTTAAAATTACAAAATCTT
CTTACGGAAGATACTTGAATTTAAAAGAAGAGGACAAAATTCTACAGATAAATGGGCACATGCCTTCTTCTCAAAATATC
AAAAATGGTTATTTAGCAAAGGCTAATAACTTAAAGGTTGAGAGACGTAATCATGAAATTCAATTGCATGGTTCAGAGGA
TTTGTCTTTAAACAGTTCAGTTAGTTTCTTTATTTATATTGTCCCTTGTATATTATTTGCACTAAGCTTATTATGTATTT
TCTATATATACAAAGTCAATCGTATAAAAAATACAGTTTCTGCTTATATTCTAATCTGCTTCTTAATTTTTATATCGATA
GCTTATTTAAGTGCAGGCGGTGTAACAAGAGGATATGAGATAAATAGATATGTTAATCTTTTTACTTTTTTAAATGTGCC
TGTACTATACCTGCATTTTTTATATCAATATTTTAAAGAATTAAAAATAAAATTTTCAGCAAAGAGTATAGTATATATTC
TTTACTGTTTACCTGTCCTTAACATTGTTACAGAACTTTTTAGATATCGATATGATTTATACTTTGTTAGAGACATGAAT
TTATTGTCATTTTTTATCGAGATACTAATAGTGTATATGTATATTGTTTATTATGCCATTATTTATAGAAAGAGAGATCA
TGCTTATCTATTAAAAGTGTTACTAATATCTAACACAATAGCTTTTTTACCATTTACTGTTCTTTATCTTCTTTCTGAAG
TTATTTTAGGACAGTATATTTATTCAGCTATAGTAACTGCTCCGTTTCTGCTCATTATTCCATTGGCATTGGTTTATCAA
TTTGTTGTCAACAAGATTTATGATATAGATTTTTTGTTGGGAAGAATTAGATACTATAGTTTTTTGTCTATTGTTCCTAC
AATAGGGGTTGTATGGCTGTCAATCTTATATGAAAGTAAAGGTAATCATTTTAACACCATTCAAATCACTTTATATGTGT
TTTTGATTTTTTTGGCGGTCTTTTACACCAAAGAGGTTTTAGACTATAAATTCCGTTTGAAACGTTTTTCAGAAAAATAC
AATTATCAAGACAGCATTTATAAATATACACAGCTTCTTAAAAGTGTGTCAGCTTTAAATCAAGTGTTTATGAATCTGAA
AAAGACTATATTGGATGTATTACCTGTAAGTAAGGCTTACATTTTTGAAATCAGTTCAGACGGAGATATTCTTTATTTTG
ATAAACAAAACATCGAACCGAATTGGCAGCCGTATAAAAAAGAATTTGATAAAGTCACATCAGAGATTGGGAAGATAATT
GAAGTAAATCAAGGATTTCTGATGAAGATTGGAGAAAGAGGGGCAAATTCATACATTTTGCTCTGTTTATCCAGCATTAA
TACCCCAAGGCTGACAAGGGATGAAATCTCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATTT
TACAGATCGAAGAACTCATGAACCATTTACAAGATCTAAAACAACAAGGTTCAAACCCGGTCTGGCTCAAAAAGCTGATG
TTTACGATTGAGGAAAAGCAGCGGTCGGATTTGGCCCGTGATCTGCATGATTCGGTGCTGCAGGATTTGATTTCTTTGAA
ACGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAAGAGCCTTGTCACATAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCGGATGTGATTTTGATGACCCGGGAGACGTGTCATGAGCTTCGGCCTCAGCTGCTGTATGATTTG
GGTCTGGTGAAGGCGGTATCCAAGCTTGCCGCTCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGACG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAATGCCATGAAGC
ATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGATGACGGGGTC
GGATGCAATCAGGAGGAAGGCAGCGGACAGGCGATGAGCATGGGGCTTTCGGGTATTAAGGAGCGCGTCCGGGCGCTTGA
CGGCCGGATGAAAATCGACACAAGTGAAGGAAATGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(568-637)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.144

100

0.594