Detailed information NTG0847341

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: QSV38_RS08950
• Genome accession: NZ_CP128410
• Coordinates: 1719001..1720044 (+)
• Length: 347 a.a.
• NCBI ID: WP_289648478.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain 7500
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1714001..1725044

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QSV38_RS08930 (QSV38_08930)	-	1714500..1714886 (+)	387	WP_217374089.1	VOC family protein	-
QSV38_RS08935 (QSV38_08935)	-	1715313..1716959 (+)	1647	WP_289648474.1	peptide ABC transporter substrate-binding protein	-
QSV38_RS08940 (QSV38_08940)	-	1717030..1717944 (+)	915	WP_274504179.1	ABC transporter permease	-
QSV38_RS08945 (QSV38_08945)	-	1717955..1718986 (+)	1032	WP_024396826.1	ABC transporter permease	-
QSV38_RS08950 (QSV38_08950)	oppD	1719001..1720044 (+)	1044	WP_289648478.1	ABC transporter ATP-binding protein	Regulator
QSV38_RS08955 (QSV38_08955)	amiF	1720041..1720976 (+)	936	WP_274504176.1	ATP-binding cassette domain-containing protein	Regulator
QSV38_RS08960 (QSV38_08960)	-	1721031..1721399 (-)	369	WP_289648481.1	DUF3397 domain-containing protein	-
QSV38_RS08965 (QSV38_08965)	rplK	1721554..1721979 (+)	426	WP_024382554.1	50S ribosomal protein L11	-
QSV38_RS08970 (QSV38_08970)	rplA	1722020..1722709 (+)	690	WP_217374084.1	50S ribosomal protein L1	-
QSV38_RS08975 (QSV38_08975)	-	1722815..1723105 (+)	291	WP_217374083.1	hypothetical protein	-
QSV38_RS08980 (QSV38_08980)	yghU	1723114..1723902 (+)	789	WP_130555256.1	glutathione-dependent disulfide-bond oxidoreductase	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 38404.97 Da
• Isoelectric Point: 5.0184

>NTDB_id=847341 QSV38_RS08950 WP_289648478.1 1719001..1720044(+) (oppD) [Streptococcus parasuis strain 7500]
MNKETILQVENLNVTFHTYAGEVKAIRDVSFTLNKGETLAIVGESGSGKSVTTRTLMGLNAKNAHLSGKIHFKDKDLSEL
SESEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEPIMLHEKVSKSEALKRALELMKKVGIPNAEEHIKDYPHQWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQAQILNLMKEIQSQTQSSIIFITHDLGVVAGMADRVAVMYAGKIVEVGTV
EEVFYNPQHPYTWGLLNSMPTTETASGSLESIPGTPPDLLNPPVGDAFAARNAYALDIDFEEQPPMFQISDSHYAATWLL
DERAPEITPPLAILKRWEKWNNKKEKQ

Nucleotide

• Length: 1044 bp

>NTDB_id=847341 QSV38_RS08950 WP_289648478.1 1719001..1720044(+) (oppD) [Streptococcus parasuis strain 7500]
ATGAATAAAGAAACGATTTTACAAGTTGAAAATTTAAATGTTACCTTTCATACCTATGCAGGTGAAGTCAAGGCGATTCG
TGATGTCAGTTTTACTTTGAATAAAGGAGAGACTCTGGCTATTGTAGGAGAGTCAGGTTCAGGTAAATCAGTAACAACAC
GTACGCTAATGGGCTTGAATGCAAAAAATGCACATTTGTCAGGTAAGATTCATTTTAAAGATAAAGACTTGAGTGAGTTG
TCAGAGAGTGAGTGGGTAAAAGTTCGTGGAAATGAAATTGCCATGATTTTCCAAGATCCAATGACAAGTTTGGATCCAAC
AATGACCATTGGAATGCAAATTGCTGAGCCAATTATGTTGCACGAAAAAGTATCGAAATCTGAGGCTTTGAAACGTGCTT
TGGAGCTCATGAAGAAGGTTGGTATTCCAAATGCTGAAGAGCACATTAAAGATTATCCACATCAGTGGTCAGGTGGGATG
CGTCAACGTGCAGTCATTGCGATTGCACTTGCAGCGAATCCAGAAATTCTAATTGCGGATGAACCAACAACTGCCTTAGA
CGTGACGATTCAAGCGCAAATTTTAAATTTGATGAAAGAAATACAGTCTCAAACACAGTCTTCTATTATCTTTATTACCC
ATGATTTGGGTGTGGTAGCTGGTATGGCAGACCGTGTGGCTGTTATGTATGCAGGGAAGATTGTGGAAGTTGGAACGGTT
GAGGAAGTATTTTATAATCCGCAACATCCTTACACATGGGGGTTATTAAACTCTATGCCGACAACAGAGACTGCTTCTGG
AAGTTTGGAATCCATTCCTGGAACTCCCCCAGATTTGTTGAATCCTCCTGTTGGAGATGCTTTTGCAGCTAGAAATGCAT
ATGCTCTCGATATTGATTTTGAAGAGCAACCGCCAATGTTCCAAATTTCAGATAGCCATTATGCAGCAACATGGTTGTTA
GATGAGCGAGCTCCTGAAATTACACCACCGTTAGCAATCTTGAAACGTTGGGAAAAATGGAATAATAAGAAGGAGAAACA
ATGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (27-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-296)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	81.287	98.559	0.801
amiE	Streptococcus salivarius strain HSISS4	56.765	97.983	0.556
amiE	Streptococcus thermophilus LMG 18311	56.471	97.983	0.553
amiE	Streptococcus thermophilus LMD-9	56.471	97.983	0.553