Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   VM636_RS13365 Genome accession   NZ_CP144555
Coordinates   3079808..3080932 (+) Length   374 a.a.
NCBI ID   WP_030421973.1    Uniprot ID   A0A940XMH0
Organism   Streptomyces sp. SCSIO 75703     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3074808..3085932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VM636_RS13350 (VM636_13350) - 3075158..3076027 (+) 870 WP_030421976.1 hypothetical protein -
  VM636_RS13355 (VM636_13355) - 3076085..3077839 (-) 1755 WP_030421975.1 BACON domain-containing protein -
  VM636_RS13360 (VM636_13360) radA 3078316..3079725 (+) 1410 WP_030421974.1 DNA repair protein RadA Machinery gene
  VM636_RS13365 (VM636_13365) disA 3079808..3080932 (+) 1125 WP_030421973.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  VM636_RS13370 (VM636_13370) - 3080972..3081814 (-) 843 WP_199809427.1 hypothetical protein -
  VM636_RS13375 (VM636_13375) - 3081989..3082639 (+) 651 WP_199809426.1 phosphatase PAP2 family protein -
  VM636_RS13380 (VM636_13380) - 3082957..3083934 (+) 978 WP_030421970.1 A/G-specific adenine glycosylase -
  VM636_RS13385 (VM636_13385) - 3084206..3084745 (+) 540 WP_030421969.1 SigE family RNA polymerase sigma factor -
  VM636_RS13390 (VM636_13390) - 3084802..3085386 (+) 585 WP_037859013.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40170.95 Da        Isoelectric Point: 5.0127

>NTDB_id=847120 VM636_RS13365 WP_030421973.1 3079808..3080932(+) (disA) [Streptomyces sp. SCSIO 75703]
MAANDRAAAPGKSGQSAGAEGLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVEVMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVSQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALTELDKLSHAELLELSTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=847120 VM636_RS13365 WP_030421973.1 3079808..3080932(+) (disA) [Streptomyces sp. SCSIO 75703]
GTGGCAGCCAACGACCGGGCAGCGGCTCCCGGAAAGTCCGGCCAGAGCGCCGGCGCGGAGGGCCTGATGCGCGCCTCGCT
GAGCGCCGTCGCACCCGGAACGGCCCTGCGTGACGGCCTGGAGCGGGTCCTGCGCGGCAACACGGGCGGTCTGATCGTGC
TCGGCTCGGACAAGACCGTCGAGGTCATGTGCACGGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACACGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTCTCCTCGGACCTGTCGAAGATCCTGCGCGCGGGCGTCCAGCTCGTCCC
GGACCCGACGATCCCCACCGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCAGCAAACAGGTCGGCTTCCCCG
TCGTCTCCGTCTCCCAGTCCATGCGGCTCATCGCCCTCTACGTGGACGGGCAGCGCCGCGTCCTGGAGGACTCCGCGGCG
ATCCTGTCCCGGGCGAACCAGGCCCTGGCGACCCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTCTCGGCGGTCTCCCAGCGCCTGGAGATGGTCCGCCGCATCG
CCACGGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGCCTGCTCGCCCTCCAGCTCGACGAACTGATCGCC
GGCGTCGAACCGGAACGCGAGCTGGTGGTGCGGGACTACGTGCCCGAGCCGACCGCCAAGCGCTCGCGCACCGTGGAGGA
GGCGCTGACCGAGCTGGACAAGCTCAGCCACGCCGAGTTGCTCGAACTGTCCACGGTGGCCCGCGCCCTGGGGTACACCG
GCTCGCCCGAGACGCTCGACTCGGCGGTCTCGCCGCGCGGTTTCCGGCTGCTGGCGAAGGTCCCCCGGCTGCCCGGCGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGACTGCAGAAGCTCCTCGCCGCCAGCGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCCCGCGCCCGCAGCGTCCGCGAGGGACTCTCCCGCCTGGCCGAGTCCTCCATCCTGGAACGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A940XMH0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.26

96.524

0.447