Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | QSJ13_RS03025 | Genome accession | NZ_CP128372 |
| Coordinates | 635949..636329 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836909.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain XH2146 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 630949..641329
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QSJ13_RS02995 (QSJ13_02995) | kdsB | 631852..632613 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| QSJ13_RS03000 (QSJ13_03000) | - | 632625..633605 (+) | 981 | WP_001075419.1 | DNA polymerase III subunit delta' | - |
| QSJ13_RS03005 (QSJ13_03005) | - | 633617..633958 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| QSJ13_RS03010 (QSJ13_03010) | - | 633976..634749 (+) | 774 | WP_000497301.1 | TatD family hydrolase | - |
| QSJ13_RS03015 (QSJ13_03015) | - | 634787..635395 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| QSJ13_RS03020 (QSJ13_03020) | - | 635405..635959 (+) | 555 | WP_000841372.1 | type II secretion system protein | - |
| QSJ13_RS03025 (QSJ13_03025) | xcpV | 635949..636329 (+) | 381 | WP_000836909.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| QSJ13_RS03030 (QSJ13_03030) | xcpW | 636329..637030 (+) | 702 | WP_000594588.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| QSJ13_RS03035 (QSJ13_03035) | gspK | 637030..637989 (+) | 960 | WP_001218621.1 | type II secretion system minor pseudopilin GspK | - |
| QSJ13_RS03040 (QSJ13_03040) | - | 638219..638815 (+) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| QSJ13_RS03045 (QSJ13_03045) | ung | 638866..639579 (+) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| QSJ13_RS03050 (QSJ13_03050) | - | 639576..640700 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| QSJ13_RS03055 (QSJ13_03055) | tadA | 640707..641210 (+) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13991.24 Da Isoelectric Point: 9.8004
>NTDB_id=847053 QSJ13_RS03025 WP_000836909.1 635949..636329(+) (xcpV) [Acinetobacter baumannii strain XH2146]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDLDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDLDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=847053 QSJ13_RS03025 WP_000836909.1 635949..636329(+) (xcpV) [Acinetobacter baumannii strain XH2146]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCTGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCTGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |