Detailed information NTG0846819

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: V3I11_RS09720
• Genome accession: NZ_CP144280
• Coordinates: 1930766..1932001 (+)
• Length: 411 a.a.
• NCBI ID: WP_005658618.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain P3_EMO
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1925766..1937001

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V3I11_RS09710 (V3I11_09710)	tig	1928755..1930053 (+)	1299	WP_042599477.1	trigger factor	-
V3I11_RS09715 (V3I11_09715)	clpP	1930145..1930756 (+)	612	WP_257003823.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
V3I11_RS09720 (V3I11_09720)	clpX	1930766..1932001 (+)	1236	WP_005658618.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
V3I11_RS09725 (V3I11_09725)	secE	1932146..1932562 (+)	417	WP_005658616.1	preprotein translocase subunit SecE	-
V3I11_RS09730 (V3I11_09730)	nusG	1932564..1933121 (+)	558	WP_005648601.1	transcription termination/antitermination protein NusG	-
V3I11_RS09735 (V3I11_09735)	-	1933272..1934024 (+)	753	WP_005687850.1	VacJ family lipoprotein	-
V3I11_RS09740 (V3I11_09740)	-	1934081..1934470 (+)	390	WP_005630808.1	RidA family protein	-
V3I11_RS09745 (V3I11_09745)	htpX	1934635..1935489 (+)	855	WP_181144556.1	protease HtpX	-
V3I11_RS09750 (V3I11_09750)	tusA	1935531..1935770 (-)	240	WP_020910189.1	sulfurtransferase TusA	-
V3I11_RS09755 (V3I11_09755)	-	1935886..1936506 (+)	621	WP_020910188.1	YigZ family protein	-

Sequence

Protein

• Length: 411 a.a.
• Molecular weight: 45610.20 Da
• Isoelectric Point: 4.7350

>NTDB_id=846819 V3I11_RS09720 WP_005658618.1 1930766..1932001(+) (clpX) [Haemophilus influenzae strain P3_EMO]
MTDKDKDLHCSFCGKEKGEVDKLIAGTGGYICNECIELCHSMLEESNDENLEESAVENKDKLPTPHEIRAHLDDYVIGQD
YAKKVLSVAVYNHYKRLRTNYESNDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVL
QKLLQNCEYDTEKAEKGIIYIDEIDKISRKSEGASITRDVSGEGVQQALLKLIEGTIASIPPQGGRKHPQQEMVKLDTSK
ILFICGGAFAGLDKIIDKRTQTSTSIGFNAKVEKDEKQQSLSELFRQVEPDDLMKFGLIPEFIGRLPMIAPLSELDEDAL
IQILTKPKNALIKQYQALFGLEKVELDFTPEALKAMAKKALERKTGARGLRSIVEAVLLDTMYDLPSLENLQKVIVDEST
IVDNLAPKLEY

Nucleotide

• Length: 1236 bp

>NTDB_id=846819 V3I11_RS09720 WP_005658618.1 1930766..1932001(+) (clpX) [Haemophilus influenzae strain P3_EMO]
ATGACAGACAAAGATAAAGATTTGCACTGCTCTTTTTGCGGAAAAGAAAAAGGCGAAGTAGATAAATTAATTGCTGGCAC
AGGCGGTTATATTTGTAATGAATGTATTGAACTTTGTCACTCAATGCTTGAAGAAAGTAATGATGAAAACCTAGAGGAAA
GTGCGGTCGAAAATAAAGATAAATTGCCAACGCCTCACGAAATTCGCGCCCATCTGGATGATTATGTTATTGGTCAAGAT
TATGCGAAAAAAGTGCTTTCTGTGGCAGTTTATAATCATTATAAACGCTTGCGAACTAACTATGAAAGCAATGATGTAGA
GCTTGGCAAAAGTAATATTTTACTTATAGGCCCTACAGGTAGCGGAAAAACGTTACTTGCGCAAACATTAGCTCGTCGTT
TAAATGTACCCTTTGCGATGGCAGATGCAACCACATTAACGGAAGCTGGTTATGTGGGAGAAGATGTAGAGAATGTATTA
CAGAAACTTTTGCAAAATTGTGAATACGATACTGAAAAAGCAGAGAAAGGCATTATTTATATTGATGAAATTGATAAAAT
TAGCCGTAAATCGGAAGGCGCATCAATTACTCGAGATGTTTCAGGAGAGGGGGTGCAACAGGCTTTATTAAAACTTATTG
AAGGTACAATAGCTTCCATTCCACCTCAAGGCGGTCGTAAACATCCACAACAAGAAATGGTAAAATTGGATACGTCTAAA
ATTCTCTTTATTTGCGGCGGTGCATTTGCAGGATTAGATAAAATTATTGATAAACGCACTCAAACCAGTACGAGTATTGG
TTTTAATGCCAAAGTTGAAAAAGATGAAAAACAACAATCTCTTTCTGAATTATTCCGTCAAGTTGAACCTGATGATTTGA
TGAAATTTGGTTTAATTCCAGAATTTATCGGACGCTTGCCAATGATTGCCCCATTAAGTGAATTAGACGAAGATGCGCTG
ATACAAATTCTCACAAAACCAAAAAACGCATTAATTAAACAATATCAAGCCTTATTTGGATTGGAAAAAGTAGAATTGGA
TTTCACACCAGAAGCATTAAAAGCAATGGCGAAAAAAGCACTTGAAAGAAAAACGGGTGCGCGTGGCTTACGTTCTATCG
TAGAAGCAGTGTTGTTAGATACAATGTATGATCTACCGTCTCTTGAGAATTTACAAAAAGTTATCGTTGATGAATCGACA
ATTGTAGATAATCTTGCGCCAAAATTAGAATATTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (110-309)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-392)

• ClpX C4-type zinc finger (zf-C4_ClpX) (8-45)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	57.843	99.27	0.574
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.138	97.08	0.535