Detailed information NTG0846740

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: QSU96_RS14425
• Genome accession: NZ_CP128200
• Coordinates: 3080634..3081638 (-)
• Length: 334 a.a.
• NCBI ID: WP_004728564.1
• Uniprot ID: -
• Organism: Vibrio furnissii strain VFBJ07
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3075634..3086638

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QSU96_RS14400 (QSU96_14400)	aroK	3076514..3077032 (-)	519	WP_004728569.1	shikimate kinase AroK	-
QSU96_RS14405 (QSU96_14405)	pilQ	3077220..3078944 (-)	1725	WP_286279664.1	type IV pilus secretin PilQ family protein	Machinery gene
QSU96_RS14410 (QSU96_14410)	pilP	3078969..3079481 (-)	513	WP_154180461.1	pilus assembly protein PilP	Machinery gene
QSU96_RS14415 (QSU96_14415)	pilO	3079471..3080061 (-)	591	WP_158141364.1	type 4a pilus biogenesis protein PilO	Machinery gene
QSU96_RS14420 (QSU96_14420)	pilN	3080054..3080644 (-)	591	WP_286279665.1	PilN domain-containing protein	Machinery gene
QSU96_RS14425 (QSU96_14425)	pilM	3080634..3081638 (-)	1005	WP_004728564.1	type IV pilus assembly protein PilM	Machinery gene
QSU96_RS14430 (QSU96_14430)	-	3081783..3084263 (+)	2481	WP_143680273.1	PBP1A family penicillin-binding protein	-
QSU96_RS14435 (QSU96_14435)	oxyR	3084350..3085246 (-)	897	WP_014204332.1	DNA-binding transcriptional regulator OxyR	-
QSU96_RS14440 (QSU96_14440)	-	3085390..3086124 (+)	735	WP_004728561.1	glutathione peroxidase	-
QSU96_RS14445 (QSU96_14445)	-	3086248..3086511 (+)	264	WP_004728560.1	DUF3624 domain-containing protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36877.16 Da
• Isoelectric Point: 6.6617

>NTDB_id=846740 QSU96_RS14425 WP_004728564.1 3080634..3081638(-) (pilM) [Vibrio furnissii strain VFBJ07]
MGKSLVTGVDIGHHSIKAVVLKPKGESYSLVGYQEIVVSDDIFADNHTLDYQKIVKKLKELKKGLPLFSRKVALAVPDNA
VISKVLQIDSDLDASEQEFAVYQAFSHQSPFPIDDLSLDFVPSGDNPAGRSTNTLYQVYATRREVVDNRLSVASKAGFEP
LLLDVQVHGLLQIWQWVSRAQQRDDWMLVDVGLTQTTLCMDFADKAPFYKDIPLGTRQWHADPTPHPVPLSEPPMAGVNE
LVERIARQVQLLLSLQGHQALGGIWLSGGGATTEGLSAALAARLNLPCELFHPLTGFVTRRRMRARVPDDLQRFSTAAGL
ALRGLNWLERDHGA

Nucleotide

• Length: 1005 bp

>NTDB_id=846740 QSU96_RS14425 WP_004728564.1 3080634..3081638(-) (pilM) [Vibrio furnissii strain VFBJ07]
ATGGGTAAATCATTAGTTACAGGTGTCGATATCGGCCACCACAGTATTAAAGCGGTGGTTTTAAAACCGAAGGGCGAATC
GTATTCGCTGGTCGGCTACCAAGAAATAGTCGTATCCGACGATATTTTCGCTGATAACCACACGCTGGATTATCAGAAAA
TTGTAAAGAAACTCAAAGAACTAAAAAAGGGATTACCGTTATTTAGTCGCAAAGTTGCGCTGGCTGTGCCGGATAATGCG
GTAATAAGTAAGGTATTACAGATAGATAGCGATTTAGATGCCAGCGAACAAGAATTTGCTGTCTATCAGGCGTTTTCCCA
TCAATCGCCGTTTCCCATCGATGATCTGAGTTTGGATTTCGTACCAAGCGGCGATAACCCCGCCGGGCGCAGCACCAATA
CCTTGTATCAAGTGTACGCCACGCGACGCGAAGTCGTCGATAACCGGTTATCGGTGGCGAGCAAAGCGGGCTTTGAGCCG
CTGCTGCTCGATGTGCAGGTGCATGGGTTGCTCCAGATTTGGCAATGGGTGAGTCGCGCGCAGCAGCGAGACGATTGGAT
GCTGGTGGACGTCGGGTTGACGCAAACCACGTTATGCATGGATTTCGCCGATAAAGCGCCCTTCTATAAAGACATTCCGC
TGGGAACGCGTCAATGGCATGCCGACCCCACGCCCCATCCTGTGCCGCTGAGCGAGCCTCCGATGGCTGGAGTCAACGAG
CTGGTTGAGCGAATTGCGCGCCAAGTGCAACTGCTGTTGTCCTTGCAGGGCCATCAAGCGCTGGGCGGAATTTGGCTGTC
GGGTGGTGGGGCGACAACGGAAGGCCTCAGCGCGGCTTTGGCTGCGCGACTGAATCTGCCGTGTGAACTGTTTCATCCGC
TGACGGGATTTGTGACGCGCCGCCGCATGCGAGCGCGTGTACCAGACGATCTGCAACGTTTTAGTACAGCGGCCGGCTTG
GCGCTGCGCGGACTCAACTGGTTGGAGCGTGACCATGGTGCATGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (239-324)

• Type IV pilus assembly protein PilM; (PilM_2) (8-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Vibrio cholerae strain A1552	64.307	100	0.653
pilM	Vibrio campbellii strain DS40M4	45.266	100	0.458