Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   QRA13_RS06640 Genome accession   NZ_CP128184
Coordinates   1433113..1434066 (-) Length   317 a.a.
NCBI ID   WP_007610578.1    Uniprot ID   -
Organism   Bacillus velezensis strain YJ0-1 isolate soil     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1428113..1439066
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA13_RS06610 (QRA13_06610) - 1428267..1429253 (-) 987 WP_029325950.1 ABC transporter ATP-binding protein -
  QRA13_RS06615 (QRA13_06615) - 1429427..1430212 (-) 786 WP_029325951.1 DUF2268 domain-containing protein -
  QRA13_RS06620 (QRA13_06620) fabF 1430295..1431533 (-) 1239 WP_007610580.1 beta-ketoacyl-ACP synthase II -
  QRA13_RS06625 (QRA13_06625) - 1431556..1432494 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  QRA13_RS06630 (QRA13_06630) - 1432662..1432880 (+) 219 WP_007409123.1 hypothetical protein -
  QRA13_RS06635 (QRA13_06635) comZ 1432966..1433100 (-) 135 WP_286281087.1 ComZ family protein Regulator
  QRA13_RS06640 (QRA13_06640) med 1433113..1434066 (-) 954 WP_007610578.1 BMP family ABC transporter substrate-binding protein Regulator
  QRA13_RS06645 (QRA13_06645) - 1434156..1434722 (-) 567 WP_224224176.1 hypothetical protein -
  QRA13_RS06650 (QRA13_06650) - 1434805..1435539 (-) 735 WP_007610576.1 hypothetical protein -
  QRA13_RS06655 (QRA13_06655) - 1435799..1435984 (+) 186 WP_003155069.1 YjzD family protein -
  QRA13_RS06660 (QRA13_06660) - 1436021..1436200 (-) 180 WP_003155070.1 YjzC family protein -
  QRA13_RS06665 (QRA13_06665) argF 1436276..1437247 (-) 972 WP_224224175.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35357.02 Da        Isoelectric Point: 4.6686

>NTDB_id=846490 QRA13_RS06640 WP_007610578.1 1433113..1434066(-) (med) [Bacillus velezensis strain YJ0-1 isolate soil]
MITRLVMIFSLLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=846490 QRA13_RS06640 WP_007610578.1 1433113..1434066(-) (med) [Bacillus velezensis strain YJ0-1 isolate soil]
TTGATCACCAGGCTTGTCATGATCTTTTCTCTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGTGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTAGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAACCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAAAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.233

100

0.782