Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | QRD89_RS11640 | Genome accession | NZ_CP128168 |
| Coordinates | 2191092..2191391 (+) | Length | 99 a.a. |
| NCBI ID | WP_026577216.1 | Uniprot ID | A0A7Z2SXD4 |
| Organism | Halobacillus sp. ACCC02827 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2186092..2196391
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QRD89_RS11615 (QRD89_11615) | - | 2187230..2188036 (+) | 807 | WP_062513763.1 | YqhG family protein | - |
| QRD89_RS11620 (QRD89_11620) | - | 2188239..2188424 (-) | 186 | WP_008637028.1 | YqzE family protein | - |
| QRD89_RS11625 (QRD89_11625) | - | 2188474..2188956 (-) | 483 | WP_008637026.1 | shikimate kinase | - |
| QRD89_RS11630 (QRD89_11630) | comGA | 2189055..2190065 (+) | 1011 | WP_062513765.1 | competence type IV pilus ATPase ComGA | - |
| QRD89_RS11635 (QRD89_11635) | - | 2190019..2191071 (+) | 1053 | WP_286095300.1 | type II secretion system F family protein | - |
| QRD89_RS11640 (QRD89_11640) | comGC | 2191092..2191391 (+) | 300 | WP_026577216.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| QRD89_RS11645 (QRD89_11645) | comGD | 2191378..2191824 (+) | 447 | WP_008637017.1 | competence type IV pilus minor pilin ComGD | - |
| QRD89_RS11650 (QRD89_11650) | - | 2191814..2192140 (+) | 327 | WP_008637016.1 | type II secretion system protein | - |
| QRD89_RS11655 (QRD89_11655) | - | 2192124..2192540 (+) | 417 | WP_062513770.1 | ComGF family competence protein | - |
| QRD89_RS11660 (QRD89_11660) | - | 2192500..2192898 (+) | 399 | WP_062513772.1 | hypothetical protein | - |
| QRD89_RS11665 (QRD89_11665) | - | 2193048..2193431 (-) | 384 | WP_008637011.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| QRD89_RS11670 (QRD89_11670) | - | 2193674..2193919 (+) | 246 | WP_008637009.1 | DUF2626 domain-containing protein | - |
| QRD89_RS11675 (QRD89_11675) | - | 2193970..2194593 (-) | 624 | WP_062513774.1 | MBL fold metallo-hydrolase | - |
| QRD89_RS11680 (QRD89_11680) | - | 2194753..2194920 (+) | 168 | WP_008637004.1 | DUF2759 family protein | - |
| QRD89_RS11685 (QRD89_11685) | fetB | 2194970..2195758 (-) | 789 | WP_008637003.1 | iron export ABC transporter permease subunit FetB | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10846.49 Da Isoelectric Point: 4.4217
>NTDB_id=846393 QRD89_RS11640 WP_026577216.1 2191092..2191391(+) (comGC) [Halobacillus sp. ACCC02827]
MKNEKGFTLIEMLIVLLVISVLLIITIPNMTKNSQNIRDKGCEALTATAEAQAEAYFLDNDAYPTTIDVLKTEGYLKETK
CPNGDTLTITDGKVDHAPS
MKNEKGFTLIEMLIVLLVISVLLIITIPNMTKNSQNIRDKGCEALTATAEAQAEAYFLDNDAYPTTIDVLKTEGYLKETK
CPNGDTLTITDGKVDHAPS
Nucleotide
Download Length: 300 bp
>NTDB_id=846393 QRD89_RS11640 WP_026577216.1 2191092..2191391(+) (comGC) [Halobacillus sp. ACCC02827]
ATGAAAAATGAAAAAGGATTCACACTAATCGAGATGCTTATCGTGCTGCTGGTCATTTCCGTACTGCTTATCATCACGAT
TCCAAACATGACCAAGAATAGTCAGAATATCCGCGACAAAGGATGCGAGGCACTCACAGCGACGGCGGAAGCCCAGGCAG
AAGCCTATTTTCTTGATAATGATGCCTATCCAACGACGATAGACGTATTAAAAACCGAGGGATATTTGAAAGAAACAAAG
TGTCCGAATGGAGATACCTTAACGATTACAGACGGCAAAGTTGATCATGCCCCTTCCTAA
ATGAAAAATGAAAAAGGATTCACACTAATCGAGATGCTTATCGTGCTGCTGGTCATTTCCGTACTGCTTATCATCACGAT
TCCAAACATGACCAAGAATAGTCAGAATATCCGCGACAAAGGATGCGAGGCACTCACAGCGACGGCGGAAGCCCAGGCAG
AAGCCTATTTTCTTGATAATGATGCCTATCCAACGACGATAGACGTATTAAAAACCGAGGGATATTTGAAAGAAACAAAG
TGTCCGAATGGAGATACCTTAACGATTACAGACGGCAAAGTTGATCATGCCCCTTCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
52.577 |
97.98 |
0.515 |
| comGC | Staphylococcus aureus MW2 |
42.708 |
96.97 |
0.414 |
| comGC | Staphylococcus aureus N315 |
42.708 |
96.97 |
0.414 |