Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QRE67_RS19470 Genome accession   NZ_CP128153
Coordinates   3898151..3898945 (-) Length   264 a.a.
NCBI ID   WP_286121862.1    Uniprot ID   -
Organism   Bacillus sp. DX3.1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3893151..3903945
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRE67_RS19430 (QRE67_19420) - 3893519..3894160 (-) 642 WP_286121855.1 DUF6241 domain-containing protein -
  QRE67_RS19435 (QRE67_19425) - 3894443..3895000 (-) 558 WP_286121856.1 hypothetical protein -
  QRE67_RS19440 (QRE67_19430) - 3895279..3896391 (+) 1113 WP_286121857.1 tetratricopeptide repeat protein -
  QRE67_RS19445 (QRE67_19435) - 3896388..3896522 (+) 135 WP_286121858.1 hypothetical protein -
  QRE67_RS19450 (QRE67_19440) - 3896709..3896894 (+) 186 WP_286121859.1 hypothetical protein -
  QRE67_RS19455 (QRE67_19445) - 3896890..3897194 (+) 305 Protein_3789 tyrosine-type recombinase/integrase -
  QRE67_RS19460 (QRE67_19450) - 3897509..3897709 (+) 201 WP_286121860.1 hypothetical protein -
  QRE67_RS19465 (QRE67_19455) - 3897770..3897907 (-) 138 WP_286121861.1 hypothetical protein -
  QRE67_RS19470 (QRE67_19460) spo0A 3898151..3898945 (-) 795 WP_286121862.1 sporulation transcription factor Spo0A Regulator
  QRE67_RS19475 (QRE67_19465) spoIVB 3899232..3900533 (-) 1302 WP_286121863.1 SpoIVB peptidase -
  QRE67_RS19480 (QRE67_19470) recN 3900652..3902391 (-) 1740 WP_286121864.1 DNA repair protein RecN Machinery gene
  QRE67_RS19485 (QRE67_19475) argR 3902669..3903118 (-) 450 WP_286121865.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29475.26 Da        Isoelectric Point: 7.4292

>NTDB_id=846353 QRE67_RS19470 WP_286121862.1 3898151..3898945(-) (spo0A) [Bacillus sp. DX3.1]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVVGIAYNGQECLNLLKEKQPDVLVLDIIMPHLDGLAVLEKMRNIERLKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKTSTTIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=846353 QRE67_RS19470 WP_286121862.1 3898151..3898945(-) (spo0A) [Bacillus sp. DX3.1]
GTGGAAAAAATCAAAGTATGTCTTGTGGATGATAATAAAGAACTTGTATCAATGTTAGAAAGTTATGTTGCTGCTCAAGA
TGATATGGAAGTAGTCGGAATTGCCTATAATGGTCAAGAGTGTTTAAACTTACTAAAAGAAAAACAACCAGATGTGCTTG
TTTTAGATATTATTATGCCACATTTAGATGGCCTAGCGGTATTGGAAAAAATGCGAAACATTGAACGACTGAAACAACCC
AATGTCATTATGCTAACGGCGTTTGGGCAAGAAGATGTAACGAAAAAAGCAGTTGATTTAGGTGCTTCTTATTTCATATT
AAAGCCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTAAGTGGTAAAACGAGTACTACAATTAAACGCCCAC
TGCCATCTTTCCGATCTGCAACAACAATAGATGGAAAACCGAAGAACTTAGATGCAAGTATTACGAGCATTATTCACGAA
ATTGGTGTGCCGGCTCATATTAAAGGATACATGTATCTGCGAGAGGCAATTTCTATGGTATATAACGACATCGAACTACT
TGGATCTATTACGAAAGTCCTATATCCAGATATCGCGAAAAAGTACAATACAACAGCAAGCCGTGTTGAACGCGCGATCC
GCCATGCAATTGAAGTAGCTTGGAGTCGCGGGAATATTGACTCCATTTCGTCCTTATTTGGTTATACAGTATCCATGTCA
AAAGCGAAACCTACGAATTCAGAATTCATTGCGATGGTTGCTGATAAGTTGAGACTGGAACATAAGGCTTCATAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

81.648

100

0.826