Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | QRE67_RS00525 | Genome accession | NZ_CP128153 |
| Coordinates | 96281..98716 (+) | Length | 811 a.a. |
| NCBI ID | WP_286123082.1 | Uniprot ID | - |
| Organism | Bacillus sp. DX3.1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 91281..103716
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QRE67_RS00510 (QRE67_00510) | - | 94006..94467 (+) | 462 | WP_286123079.1 | CtsR family transcriptional regulator | - |
| QRE67_RS00515 (QRE67_00515) | - | 94641..95189 (+) | 549 | WP_286123080.1 | UvrB/UvrC motif-containing protein | - |
| QRE67_RS00520 (QRE67_00520) | - | 95194..96258 (+) | 1065 | WP_286123081.1 | protein arginine kinase | - |
| QRE67_RS00525 (QRE67_00525) | clpC | 96281..98716 (+) | 2436 | WP_286123082.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| QRE67_RS00530 (QRE67_00530) | radA | 98816..100192 (+) | 1377 | WP_286123083.1 | DNA repair protein RadA | Machinery gene |
| QRE67_RS00535 (QRE67_00535) | disA | 100196..101269 (+) | 1074 | WP_286123084.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| QRE67_RS00540 (QRE67_00540) | - | 101430..102536 (+) | 1107 | WP_286123085.1 | PIN/TRAM domain-containing protein | - |
| QRE67_RS00545 (QRE67_00545) | ispD | 102553..103227 (+) | 675 | WP_286123086.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90564.57 Da Isoelectric Point: 6.4862
>NTDB_id=846327 QRE67_RS00525 WP_286123082.1 96281..98716(+) (clpC) [Bacillus sp. DX3.1]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALVALGLSPEKVQKEVEALIGRGTEMSQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEATSGHQGGASASAN
TPTLDSLARDLTVVAREGRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEIPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESVQILRGLRDRYEAHHRVSITDDAIEASVKLADRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEETKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETNKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVILLVNQLVKRLKENEIDLELTSAAIEAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVVFDTEGE
SFVIRSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALVALGLSPEKVQKEVEALIGRGTEMSQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEATSGHQGGASASAN
TPTLDSLARDLTVVAREGRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEIPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESVQILRGLRDRYEAHHRVSITDDAIEASVKLADRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEETKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETNKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVILLVNQLVKRLKENEIDLELTSAAIEAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVVFDTEGE
SFVIRSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=846327 QRE67_RS00525 WP_286123082.1 96281..98716(+) (clpC) [Bacillus sp. DX3.1]
ATGATGTTTGGAAGATTTACAGAACGAGCACAGAAGGTATTAGCTTTATCTCAAGAAGAGGCAATTCGCATTGGTCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCGGCTAAAGCATTAGTTGCTCTTG
GGTTAAGTCCAGAAAAGGTGCAAAAAGAGGTAGAAGCATTAATCGGTCGTGGAACAGAAATGTCTCAAACGGTACATTAC
ACACCTCGTGCAAAAAAAGTAATTGAGTTATCAATGGATGAGGCACGTAAACTTGGTCATTCTTATGTCGGAACGGAGCA
TATTCTACTTGGATTGATTCGTGAAGGTGAAGGAGTAGCGGCACGCGTTTTAAATAACTTAGGTGTAAGTTTAAATAAGG
CAAGACAACAAGTACTGCAGCTTCTTGGAAGCAATGAGGCAACATCGGGTCATCAAGGCGGTGCTTCAGCAAGTGCGAAT
ACACCAACACTTGATAGTTTAGCACGTGATTTAACAGTTGTTGCACGTGAAGGACGGTTAGATCCTGTTATTGGCCGCAG
TAAAGAAATTCAACGTGTAATTGAAGTGCTAAGCCGTAGAACGAAAAATAACCCAGTGCTAATCGGGGAACCCGGCGTAG
GTAAAACAGCAATTGCAGAAGGATTAGCACAACAAATTGTAAACAATGAAATTCCTGAAACTTTACGTGATAAGCGTGTT
ATGACATTAGATATGGGAACCGTTGTTGCTGGTACGAAATATCGTGGTGAATTTGAAGATCGCTTAAAGAAAGTAATGGA
TGAAATTCGCCAAGCGGGTAATATTATCTTATTTATCGATGAACTTCATACATTAATCGGTGCGGGTGGTGCAGAAGGTG
CGATTGATGCATCTAATATTTTAAAACCATCTTTAGCGCGCGGGGAACTGCAATGTATTGGGGCGACAACGCTAGATGAA
TACCGTAAATATATTGAAAAAGATGCAGCATTAGAGCGACGGTTCCAACCGATTCATGTTGATGAACCAAGCTTAGAAGA
ATCTGTTCAAATTTTAAGAGGATTACGTGATCGTTACGAAGCGCATCACCGTGTTTCTATTACAGATGATGCAATTGAAG
CGTCTGTAAAGCTTGCTGACCGTTATATTACAGATCGTTTCTTACCAGATAAGGCAATTGATTTAATCGATGAAGCTGCT
TCCAAAGTACGCTTACGTTCTTATACAACACCACCAAATTTAAAAGAACTTGAAGTCAAACTTGAAGAAATTCGCAAAGA
AAAGGATGCAGCTGTACAAAGTCAAGAATTTGAGAAGGCAGCTTCCTTACGTGATATGGAACAACGTTTACGTGAAAAAT
TAGAAGAAACAAAACGCCAATGGAAAGAGCAGCAAGGAAAAGAAAACTCGGAAGTGACAGTAGAAGATATTGCAAATGTC
GTTTCTACATGGACGCGTATCCCTGTTTCTAAACTTGCACAAACAGAAACAAATAAATTGTTGAATCTAGAATCCATTTT
ACATGATCGTGTAATTGGTCAAGATGAAGCGGTTGTTGCGGTAGCAAAAGCAGTGCGCCGTGCGCGAGCTGGTCTGAAGG
ATCCAAAACGTCCGATTGGCTCATTTATTTTCTTAGGACCGACTGGTGTAGGTAAAACTGAGCTTGCACGTGCGTTAGCA
GAATCTATGTTTGGTGATGAGGATGCAATGATCCGTATTGACATGTCTGAGTACATGGAGAAACATTCTACTTCTCGTTT
AGTGGGATCTCCTCCAGGATATGTTGGATACGAAGAAGGTGGTCAACTGACAGAAAAAGTTCGTCGTAAACCATATTCTG
TTGTTCTATTAGATGAAGTAGAGAAGGCACATCCAGATGTATTTAACATTTTACTGCAAGTGTTAGAGGATGGTCGTTTA
ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACGATTGTAATTATGACATCTAACGTTGGCGCTGAGGCGTTAAA
ACGTAATAAACATCTTGGTTTTAATGTGCAAGATGAGAGCCGTGATTACTCAGATATGAAAGGAAAAGTAATGGATGAAC
TGAAAAAGGCATTTCGTCCAGAGTTCTTAAACCGTATCGATGAAATTATTGTCTTCCATATGCTTGAGAAAAAACATATT
CAAGAAATTGTAATCCTTCTGGTTAATCAATTAGTGAAACGCTTAAAAGAAAACGAAATTGATTTAGAGTTAACAAGCGC
GGCAATTGAAGCCATTGCTGATAAAGGATTTGACCGAGAGTACGGTGCTCGTCCACTCCGCCGAGCAATTCAAAAACATG
TGGAGGATCGATTATCAGAAGAGCTTCTAAAAGGAGCGATTGAGAAAGGTCAAAAAGTTGTTTTTGATACTGAAGGAGAA
TCATTTGTCATTCGCAGTGCAGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAACGAGCACAGAAGGTATTAGCTTTATCTCAAGAAGAGGCAATTCGCATTGGTCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCGGCTAAAGCATTAGTTGCTCTTG
GGTTAAGTCCAGAAAAGGTGCAAAAAGAGGTAGAAGCATTAATCGGTCGTGGAACAGAAATGTCTCAAACGGTACATTAC
ACACCTCGTGCAAAAAAAGTAATTGAGTTATCAATGGATGAGGCACGTAAACTTGGTCATTCTTATGTCGGAACGGAGCA
TATTCTACTTGGATTGATTCGTGAAGGTGAAGGAGTAGCGGCACGCGTTTTAAATAACTTAGGTGTAAGTTTAAATAAGG
CAAGACAACAAGTACTGCAGCTTCTTGGAAGCAATGAGGCAACATCGGGTCATCAAGGCGGTGCTTCAGCAAGTGCGAAT
ACACCAACACTTGATAGTTTAGCACGTGATTTAACAGTTGTTGCACGTGAAGGACGGTTAGATCCTGTTATTGGCCGCAG
TAAAGAAATTCAACGTGTAATTGAAGTGCTAAGCCGTAGAACGAAAAATAACCCAGTGCTAATCGGGGAACCCGGCGTAG
GTAAAACAGCAATTGCAGAAGGATTAGCACAACAAATTGTAAACAATGAAATTCCTGAAACTTTACGTGATAAGCGTGTT
ATGACATTAGATATGGGAACCGTTGTTGCTGGTACGAAATATCGTGGTGAATTTGAAGATCGCTTAAAGAAAGTAATGGA
TGAAATTCGCCAAGCGGGTAATATTATCTTATTTATCGATGAACTTCATACATTAATCGGTGCGGGTGGTGCAGAAGGTG
CGATTGATGCATCTAATATTTTAAAACCATCTTTAGCGCGCGGGGAACTGCAATGTATTGGGGCGACAACGCTAGATGAA
TACCGTAAATATATTGAAAAAGATGCAGCATTAGAGCGACGGTTCCAACCGATTCATGTTGATGAACCAAGCTTAGAAGA
ATCTGTTCAAATTTTAAGAGGATTACGTGATCGTTACGAAGCGCATCACCGTGTTTCTATTACAGATGATGCAATTGAAG
CGTCTGTAAAGCTTGCTGACCGTTATATTACAGATCGTTTCTTACCAGATAAGGCAATTGATTTAATCGATGAAGCTGCT
TCCAAAGTACGCTTACGTTCTTATACAACACCACCAAATTTAAAAGAACTTGAAGTCAAACTTGAAGAAATTCGCAAAGA
AAAGGATGCAGCTGTACAAAGTCAAGAATTTGAGAAGGCAGCTTCCTTACGTGATATGGAACAACGTTTACGTGAAAAAT
TAGAAGAAACAAAACGCCAATGGAAAGAGCAGCAAGGAAAAGAAAACTCGGAAGTGACAGTAGAAGATATTGCAAATGTC
GTTTCTACATGGACGCGTATCCCTGTTTCTAAACTTGCACAAACAGAAACAAATAAATTGTTGAATCTAGAATCCATTTT
ACATGATCGTGTAATTGGTCAAGATGAAGCGGTTGTTGCGGTAGCAAAAGCAGTGCGCCGTGCGCGAGCTGGTCTGAAGG
ATCCAAAACGTCCGATTGGCTCATTTATTTTCTTAGGACCGACTGGTGTAGGTAAAACTGAGCTTGCACGTGCGTTAGCA
GAATCTATGTTTGGTGATGAGGATGCAATGATCCGTATTGACATGTCTGAGTACATGGAGAAACATTCTACTTCTCGTTT
AGTGGGATCTCCTCCAGGATATGTTGGATACGAAGAAGGTGGTCAACTGACAGAAAAAGTTCGTCGTAAACCATATTCTG
TTGTTCTATTAGATGAAGTAGAGAAGGCACATCCAGATGTATTTAACATTTTACTGCAAGTGTTAGAGGATGGTCGTTTA
ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACGATTGTAATTATGACATCTAACGTTGGCGCTGAGGCGTTAAA
ACGTAATAAACATCTTGGTTTTAATGTGCAAGATGAGAGCCGTGATTACTCAGATATGAAAGGAAAAGTAATGGATGAAC
TGAAAAAGGCATTTCGTCCAGAGTTCTTAAACCGTATCGATGAAATTATTGTCTTCCATATGCTTGAGAAAAAACATATT
CAAGAAATTGTAATCCTTCTGGTTAATCAATTAGTGAAACGCTTAAAAGAAAACGAAATTGATTTAGAGTTAACAAGCGC
GGCAATTGAAGCCATTGCTGATAAAGGATTTGACCGAGAGTACGGTGCTCGTCCACTCCGCCGAGCAATTCAAAAACATG
TGGAGGATCGATTATCAGAAGAGCTTCTAAAAGGAGCGATTGAGAAAGGTCAAAAAGTTGTTTTTGATACTGAAGGAGAA
TCATTTGTCATTCGCAGTGCAGAAAAGGTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
85.556 |
99.877 |
0.855 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.5 |
98.644 |
0.488 |
| clpC | Streptococcus thermophilus LMD-9 |
46.33 |
100 |
0.475 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.884 |
100 |
0.467 |
| clpC | Streptococcus mutans UA159 |
44.898 |
100 |
0.461 |
| clpC | Streptococcus pneumoniae D39 |
46.801 |
98.274 |
0.46 |
| clpC | Streptococcus pneumoniae Rx1 |
46.801 |
98.274 |
0.46 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.5 |
98.644 |
0.459 |
| clpE | Streptococcus mutans UA159 |
53.231 |
80.148 |
0.427 |
| clpE | Streptococcus pneumoniae R6 |
52.194 |
81.504 |
0.425 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.194 |
81.504 |
0.425 |
| clpE | Streptococcus pneumoniae Rx1 |
52.194 |
81.504 |
0.425 |
| clpE | Streptococcus pneumoniae D39 |
52.194 |
81.504 |
0.425 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.271 |
84.587 |
0.417 |