Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   V2176_RS15290 Genome accession   NZ_CP143963
Coordinates   2900267..2901136 (-) Length   289 a.a.
NCBI ID   WP_330937912.1    Uniprot ID   -
Organism   Bacillus licheniformis strain FUA2151     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2895267..2906136
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V2176_RS15255 (V2176_15255) - 2895438..2895914 (+) 477 WP_330937910.1 Na+/H+ antiporter subunit E -
  V2176_RS15260 (V2176_15260) - 2895914..2896198 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  V2176_RS15265 (V2176_15265) mnhG 2896182..2896556 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  V2176_RS15270 (V2176_15270) - 2896596..2896985 (-) 390 WP_003184847.1 hotdog fold thioesterase -
  V2176_RS15275 (V2176_15275) comA 2897002..2897640 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  V2176_RS15280 (V2176_15280) comP 2897727..2900048 (-) 2322 WP_330937911.1 ATP-binding protein Regulator
  V2176_RS15285 (V2176_15285) comX 2900088..2900252 (-) 165 WP_011198251.1 competence pheromone ComX -
  V2176_RS15290 (V2176_15290) comQ 2900267..2901136 (-) 870 WP_330937912.1 polyprenyl synthetase family protein Regulator
  V2176_RS15295 (V2176_15295) degQ 2901325..2901465 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  V2176_RS15300 (V2176_15300) - 2901951..2902298 (+) 348 WP_009329512.1 hypothetical protein -
  V2176_RS15305 (V2176_15305) - 2902341..2903561 (-) 1221 WP_330937913.1 EAL and HDOD domain-containing protein -
  V2176_RS15310 (V2176_15310) - 2903740..2905149 (-) 1410 WP_228767691.1 nicotinate phosphoribosyltransferase -
  V2176_RS15315 (V2176_15315) - 2905227..2905778 (-) 552 WP_003184868.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 289 a.a.        Molecular weight: 32769.49 Da        Isoelectric Point: 4.6799

>NTDB_id=845771 V2176_RS15290 WP_330937912.1 2900267..2901136(-) (comQ) [Bacillus licheniformis strain FUA2151]
MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEPWM
KINRSVAMNAATALYTISIKVIGSVSKEPVFFEKLMEYTLQLMQGQHDDLSNRPATEDECLDMIKRKSGALTALPCVLGA
MLATGKFDPTVEKYAYQLGIASQIENDYKALFYDSKSDIAKKKRTLAYLYLSRKFNQPSIDLLKTFETEDKIADKEIKCY
KEKLKAAGVTQYMYVMNQLAIQKFKKGIGELELGDMEKERLMSTLLNNN

Nucleotide


Download         Length: 870 bp        

>NTDB_id=845771 V2176_RS15290 WP_330937912.1 2900267..2901136(-) (comQ) [Bacillus licheniformis strain FUA2151]
ATGAATCATTTTATAGACCTTGAGATTCCCAATGCGGACTTAAATCGGACGCTGCACGCTTTTCTAGATGCAAAGGACCA
GTTGCATTTCAGCGAGCTTGCTTTTTATCATTACCAAAGTTTCGGCGGCACGGACACCGATGCGGCAGAAACCCTTGGAG
CAGGCATTGAACTCTTGATTCTTGCGTTTGATATATTCGATGATTTAGAGGATGAAGACAGCCCCGATGAACCTTGGATG
AAAATCAACCGTTCAGTCGCAATGAATGCGGCGACTGCGCTTTATACAATAAGCATTAAAGTGATCGGTTCGGTGTCGAA
AGAACCGGTGTTTTTCGAAAAGCTAATGGAATATACACTTCAATTGATGCAGGGACAGCATGACGATCTCAGCAACCGCC
CTGCCACTGAAGATGAGTGCCTTGACATGATCAAGCGTAAATCCGGGGCGCTGACAGCCTTGCCATGCGTGCTGGGAGCT
ATGCTTGCTACGGGCAAATTTGACCCGACGGTTGAAAAGTACGCCTACCAGCTGGGCATTGCTTCACAAATTGAAAATGA
TTATAAAGCACTTTTTTATGATTCAAAAAGCGATATCGCCAAGAAAAAGCGGACGCTTGCGTATTTATATTTGTCAAGAA
AATTTAACCAGCCGTCGATTGATTTGTTAAAAACATTTGAAACTGAGGATAAAATTGCCGATAAAGAAATAAAATGCTAT
AAAGAGAAATTGAAGGCAGCAGGCGTCACTCAGTATATGTATGTTATGAATCAGCTCGCTATTCAGAAATTTAAGAAGGG
AATCGGGGAGCTTGAGTTGGGGGATATGGAGAAAGAACGTTTGATGTCTACCCTGCTGAATAACAATTAA

Domains


Predicted by InterProScan.

(41-227)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.361

100

0.457