Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | VXF94_RS03750 | Genome accession | NZ_CP143956 |
| Coordinates | 788960..791056 (+) | Length | 698 a.a. |
| NCBI ID | WP_013352040.1 | Uniprot ID | A0A9P1JGN0 |
| Organism | Bacillus amyloliquefaciens strain Fad 108 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 783960..796056
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VXF94_RS03725 (VXF94_03725) | queE | 784228..784959 (-) | 732 | WP_013352044.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| VXF94_RS03730 (VXF94_03730) | queD | 784952..785332 (-) | 381 | WP_232469734.1 | 6-carboxytetrahydropterin synthase QueD | - |
| VXF94_RS03735 (VXF94_03735) | queC | 785393..786052 (-) | 660 | WP_003154679.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| VXF94_RS03740 (VXF94_03740) | - | 786304..787426 (-) | 1123 | Protein_751 | hypothetical protein | - |
| VXF94_RS03745 (VXF94_03745) | - | 787525..788562 (-) | 1038 | WP_330937802.1 | hypothetical protein | - |
| VXF94_RS03750 (VXF94_03750) | clpE | 788960..791056 (+) | 2097 | WP_013352040.1 | ATP-dependent protease ATP-binding subunit ClpE | Regulator |
| VXF94_RS03755 (VXF94_03755) | motA | 791223..792038 (+) | 816 | WP_013352039.1 | flagellar motor stator protein MotA | - |
| VXF94_RS03760 (VXF94_03760) | motB | 792010..792813 (+) | 804 | WP_013352038.1 | flagellar motor protein MotB | - |
| VXF94_RS03765 (VXF94_03765) | - | 792849..793295 (-) | 447 | WP_013352037.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| VXF94_RS03770 (VXF94_03770) | - | 793495..795012 (+) | 1518 | WP_088612710.1 | ATP-binding protein | - |
| VXF94_RS03775 (VXF94_03775) | - | 795221..795481 (-) | 261 | WP_013352035.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
Sequence
Protein
Download Length: 698 a.a. Molecular weight: 78004.15 Da Isoelectric Point: 5.2483
>NTDB_id=845552 VXF94_RS03750 WP_013352040.1 788960..791056(+) (clpE) [Bacillus amyloliquefaciens strain Fad 108]
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPSMSMGPQSFGFPFEQGFAPDQHKQQAGRKKGLLDELAQNV
TNGAKAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPSIEQAISILEGIKDKYEKYHSVTFSDEAIKACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EEAAERLKAIDAEKTKALQEENYELAAKLRDEEVALEKQLAQESPVSSSEIGAEHIQAIIEQKTGIPVGKLQADEQVKMK
ELEERLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQTKVGFQSEESVMEEQTLIDSLSSFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLAELEDTLKERGISLCVTDD
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDDNEIKAFHVVMEEDDIKVRAQ
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPSMSMGPQSFGFPFEQGFAPDQHKQQAGRKKGLLDELAQNV
TNGAKAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPSIEQAISILEGIKDKYEKYHSVTFSDEAIKACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EEAAERLKAIDAEKTKALQEENYELAAKLRDEEVALEKQLAQESPVSSSEIGAEHIQAIIEQKTGIPVGKLQADEQVKMK
ELEERLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQTKVGFQSEESVMEEQTLIDSLSSFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLAELEDTLKERGISLCVTDD
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDDNEIKAFHVVMEEDDIKVRAQ
Nucleotide
Download Length: 2097 bp
>NTDB_id=845552 VXF94_RS03750 WP_013352040.1 788960..791056(+) (clpE) [Bacillus amyloliquefaciens strain Fad 108]
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGTCTATGAGCATGGGACCGCAATCTTTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCGGATCAACATAAACAGCAGGCCGGCCGTAAAAAAGGCCTGCTCGACGAGCTCGCCCAAAACGTC
ACAAACGGCGCAAAAGCAGGTCTGATTGATCCTGTGATCGGCCGCGATGAAGAAGTGGCGCGCGTCATTGAAATTTTGAA
CCGCCGGAATAAAAACAATCCGGTGCTTATCGGTGAACCGGGTGTCGGTAAAACGGCTATTGCAGAAGGCTTAGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAATAAATTGAAAAACAAAGAGCTTTATCTGCTTGATGTCGCTTCCCTCGTCGCCAAT
ACAGGAATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAGCGGAAAAACGTCATTTTGTT
CATTGATGAGATTCACCTTCTTGTAGGCGCCGGCTCTGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCTGCGC
TTGCCAGAGGCGAACTGCAGGTCATCGGGGCGACGACATTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAGCCTTCTATAGAACAAGCCATCAGCATTCTTGAAGGCATTAAAGATAAATA
TGAGAAATACCACAGCGTCACATTCAGCGATGAAGCGATCAAGGCGTGTGTTACGCTTTCTTCCCGCTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTGTTAGATGAAGCCGGCTCCAAAGCAAATCTGGAGCTTGATACCGTAAATGAA
GAAGAAGCGGCTGAGCGACTCAAAGCAATTGACGCGGAGAAAACAAAAGCGCTTCAGGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGTGGCATTGGAAAAGCAGCTGGCACAAGAATCACCGGTCTCTTCTTCAGAAATCGGGGCGG
AGCATATTCAAGCCATCATTGAACAGAAAACAGGCATTCCGGTCGGAAAACTGCAGGCTGATGAACAAGTCAAAATGAAA
GAACTTGAAGAACGCCTTCATCAGCGCGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCGGTAAGACGAAG
CCGCGCCGGCTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGGGTCGGAAAAACCGAGT
TATCAAAAACACTCGCGGATGAACTTTTCGGCACAAAAGATTCCATCATTCGGCTCGATATGAGTGAATACATGGAAAAA
CACGCCGTTTCAAAAATTATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTACG
GCGCAATCCGTACAGCATCGTGCTCCTTGATGAGATTGAAAAAGCGCACCCTGACGTCCAGCATATGTTCCTGCAGATTA
TGGAGGACGGACGTCTGACAGACAGCCAGGGCAGAACGGTCAGCTTTAAAGATACCGTTTTGATCATGACAAGCAATGCG
GGAACCGGCGAAAAACAGACGAAAGTCGGGTTCCAATCTGAAGAAAGCGTTATGGAAGAACAAACGCTGATTGATTCACT
GAGCTCGTTCTTTAAACCTGAATTTTTAAACCGGTTTGACAGCATCATTGAATTCCAATCTCTGAAAAAAGAACATCTCG
TAAAAATCGTCAGTCTGCTTCTCGCAGAACTTGAAGACACATTAAAAGAGCGCGGCATCAGTCTCTGCGTCACAGACGAT
GCGAAAGAAAAAATCGCTGAAATCGGCTACCACCCTGCTTTCGGTGCACGCCCGCTCAGAAGAACGATCCAAGAATTGAT
CGAGGACGAAATGACAGACCTCTTATTGGATGACAATGAAATAAAAGCCTTCCATGTTGTAATGGAAGAGGATGACATCA
AAGTCCGTGCACAATAA
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGTCTATGAGCATGGGACCGCAATCTTTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCGGATCAACATAAACAGCAGGCCGGCCGTAAAAAAGGCCTGCTCGACGAGCTCGCCCAAAACGTC
ACAAACGGCGCAAAAGCAGGTCTGATTGATCCTGTGATCGGCCGCGATGAAGAAGTGGCGCGCGTCATTGAAATTTTGAA
CCGCCGGAATAAAAACAATCCGGTGCTTATCGGTGAACCGGGTGTCGGTAAAACGGCTATTGCAGAAGGCTTAGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAATAAATTGAAAAACAAAGAGCTTTATCTGCTTGATGTCGCTTCCCTCGTCGCCAAT
ACAGGAATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAGCGGAAAAACGTCATTTTGTT
CATTGATGAGATTCACCTTCTTGTAGGCGCCGGCTCTGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCTGCGC
TTGCCAGAGGCGAACTGCAGGTCATCGGGGCGACGACATTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAGCCTTCTATAGAACAAGCCATCAGCATTCTTGAAGGCATTAAAGATAAATA
TGAGAAATACCACAGCGTCACATTCAGCGATGAAGCGATCAAGGCGTGTGTTACGCTTTCTTCCCGCTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTGTTAGATGAAGCCGGCTCCAAAGCAAATCTGGAGCTTGATACCGTAAATGAA
GAAGAAGCGGCTGAGCGACTCAAAGCAATTGACGCGGAGAAAACAAAAGCGCTTCAGGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGTGGCATTGGAAAAGCAGCTGGCACAAGAATCACCGGTCTCTTCTTCAGAAATCGGGGCGG
AGCATATTCAAGCCATCATTGAACAGAAAACAGGCATTCCGGTCGGAAAACTGCAGGCTGATGAACAAGTCAAAATGAAA
GAACTTGAAGAACGCCTTCATCAGCGCGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCGGTAAGACGAAG
CCGCGCCGGCTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGGGTCGGAAAAACCGAGT
TATCAAAAACACTCGCGGATGAACTTTTCGGCACAAAAGATTCCATCATTCGGCTCGATATGAGTGAATACATGGAAAAA
CACGCCGTTTCAAAAATTATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTACG
GCGCAATCCGTACAGCATCGTGCTCCTTGATGAGATTGAAAAAGCGCACCCTGACGTCCAGCATATGTTCCTGCAGATTA
TGGAGGACGGACGTCTGACAGACAGCCAGGGCAGAACGGTCAGCTTTAAAGATACCGTTTTGATCATGACAAGCAATGCG
GGAACCGGCGAAAAACAGACGAAAGTCGGGTTCCAATCTGAAGAAAGCGTTATGGAAGAACAAACGCTGATTGATTCACT
GAGCTCGTTCTTTAAACCTGAATTTTTAAACCGGTTTGACAGCATCATTGAATTCCAATCTCTGAAAAAAGAACATCTCG
TAAAAATCGTCAGTCTGCTTCTCGCAGAACTTGAAGACACATTAAAAGAGCGCGGCATCAGTCTCTGCGTCACAGACGAT
GCGAAAGAAAAAATCGCTGAAATCGGCTACCACCCTGCTTTCGGTGCACGCCCGCTCAGAAGAACGATCCAAGAATTGAT
CGAGGACGAAATGACAGACCTCTTATTGGATGACAATGAAATAAAAGCCTTCCATGTTGTAATGGAAGAGGATGACATCA
AAGTCCGTGCACAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
57.319 |
100 |
0.6 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
56.369 |
100 |
0.596 |
| clpE | Streptococcus pneumoniae TIGR4 |
55.995 |
100 |
0.589 |
| clpE | Streptococcus pneumoniae D39 |
55.586 |
100 |
0.585 |
| clpE | Streptococcus pneumoniae Rx1 |
55.586 |
100 |
0.585 |
| clpE | Streptococcus pneumoniae R6 |
55.586 |
100 |
0.585 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
54.56 |
91.117 |
0.497 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.544 |
90.401 |
0.43 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.365 |
88.682 |
0.411 |
| clpC | Streptococcus pneumoniae Rx1 |
46.365 |
88.682 |
0.411 |
| clpC | Streptococcus pneumoniae D39 |
46.365 |
88.682 |
0.411 |
| clpC | Streptococcus thermophilus LMD-9 |
45.455 |
88.252 |
0.401 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.114 |
87.966 |
0.397 |
| clpC | Streptococcus mutans UA159 |
45.114 |
87.966 |
0.397 |
| clpA | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
41.749 |
86.819 |
0.362 |