Detailed information NTG0084536

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: JQN53_RS01320
• Genome accession: NZ_AP024301
• Coordinates: 235213..236217 (-)
• Length: 334 a.a.
• NCBI ID: WP_024118955.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain HB5002
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 230213..241217

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JQN53_RS01295 (TthHB5002_02510)	hisG	231107..231727 (+)	621	WP_203971493.1	ATP phosphoribosyltransferase	-
JQN53_RS01300 (TthHB5002_02520)	trmH	231724..232308 (+)	585	WP_024118959.1	tRNA (guanosine(18)-2'-O)-methyltransferase TrmH	-
JQN53_RS01305 (TthHB5002_02530)	-	232298..233251 (-)	954	WP_203971495.1	branched-chain amino acid transaminase	-
JQN53_RS01310 (TthHB5002_02540)	-	233238..234191 (-)	954	WP_143590348.1	hydrogen peroxide-inducible genes activator	-
JQN53_RS01315 (TthHB5002_02550)	-	234301..235209 (+)	909	WP_024118956.1	manganese catalase family protein	-
JQN53_RS01320 (TthHB5002_02560)	dprA	235213..236217 (-)	1005	WP_024118955.1	DNA-processing protein DprA	Machinery gene
JQN53_RS01325 (TthHB5002_02570)	era	236302..237207 (+)	906	WP_143590350.1	GTPase Era	-
JQN53_RS01330 (TthHB5002_02580)	-	237252..238139 (+)	888	WP_011174227.1	acyltransferase	-
JQN53_RS01340 (TthHB5002_02590)	-	238337..239311 (+)	975	WP_011227723.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	-
JQN53_RS01345 (TthHB5002_02600)	-	239289..239837 (-)	549	WP_203971497.1	Uma2 family endonuclease	-
JQN53_RS01350 (TthHB5002_02610)	-	239848..241068 (-)	1221	WP_203971498.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36217.10 Da
• Isoelectric Point: 6.8892

>NTDB_id=84536 JQN53_RS01320 WP_024118955.1 235213..236217(-) (dprA) [Thermus thermophilus strain HB5002]
MDPLALALLPGIGPKRLLEVLKAEDPLGFLRERFPEAWRHLPEAEAQAERERRRAEALGVRLLGLWEEGFPEGLKALPQP
PTHLYLKGELPPEREAVALVGTRRASPWALAFARRLARELAEAGLWVVSGLARGIDREAHLGALEAGGRTLGVLGSALDR
VYPPENRPLAQRMDLLSEFPFGTGPKPEFFPRRNRLIAGLCRAVVVVEAPLDSGALITARHALELGKEVLAVPGRPTDER
SLGANRLIQDGAYPVLSAEDVLSYLGMSARPKPLPGLSPEEEALYALLQEKKEALPEALAMALGIPPERVLSLLTLLELK
GLARALPGGRYGPG

Nucleotide

• Length: 1005 bp

>NTDB_id=84536 JQN53_RS01320 WP_024118955.1 235213..236217(-) (dprA) [Thermus thermophilus strain HB5002]
GTGGACCCCTTGGCCCTCGCCCTCCTCCCGGGCATCGGCCCCAAGCGGCTTCTGGAGGTCCTAAAGGCGGAGGACCCTCT
GGGCTTCCTGCGGGAGCGCTTCCCCGAGGCCTGGCGGCACCTCCCCGAGGCCGAGGCCCAGGCGGAAAGGGAGAGGCGGC
GCGCCGAGGCCCTAGGGGTGCGCCTCCTGGGCCTCTGGGAGGAGGGCTTCCCCGAGGGGCTGAAGGCGCTTCCCCAGCCG
CCCACCCACCTCTACCTGAAGGGGGAGCTTCCCCCGGAAAGGGAGGCGGTGGCCCTCGTGGGCACGCGCCGGGCCTCCCC
TTGGGCCCTGGCCTTTGCCCGGAGGCTCGCTCGGGAGCTGGCCGAGGCCGGGCTTTGGGTGGTCTCGGGCCTCGCCCGGG
GCATAGACCGGGAGGCCCACCTCGGGGCCCTCGAGGCCGGGGGGCGCACCCTGGGCGTCTTGGGAAGCGCCCTGGACCGG
GTCTACCCCCCGGAAAACCGCCCTTTGGCCCAACGGATGGACCTCCTCTCCGAGTTCCCCTTCGGGACCGGCCCTAAGCC
CGAGTTCTTTCCCCGGCGGAACCGCCTCATCGCCGGGCTTTGCCGGGCGGTGGTCGTGGTGGAGGCCCCCCTGGACTCCG
GGGCCCTCATCACCGCCCGCCACGCCCTGGAGCTCGGCAAGGAGGTGCTGGCCGTGCCCGGAAGGCCCACGGACGAGCGC
TCCCTGGGGGCGAACCGCCTCATCCAGGACGGGGCCTACCCGGTGCTCTCCGCCGAGGACGTCCTCTCCTACCTGGGAAT
GTCCGCAAGGCCCAAGCCCCTCCCGGGCCTCTCCCCGGAGGAGGAGGCCCTTTACGCCCTCCTGCAGGAAAAGAAGGAGG
CGCTCCCCGAGGCCCTGGCCATGGCCCTGGGGATCCCCCCGGAGCGGGTGCTCTCCCTTCTCACCCTTTTGGAGCTAAAG
GGCCTGGCCCGGGCCCTCCCGGGAGGGCGCTACGGGCCAGGCTAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (269-329)

• DNA recombination-mediator protein A (DNA_processg_A) (56-255)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Thermus thermophilus HB27	99.102	100	0.991
dprA	Vibrio campbellii strain DS40M4	38.547	100	0.413
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	45.734	87.725	0.401
dprA	Vibrio cholerae strain A1552	37.535	100	0.401