Detailed information NTG0845185

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: QSG85_RS16100
• Genome accession: NZ_CP127906
• Coordinates: 3458243..3459103 (+)
• Length: 286 a.a.
• NCBI ID: WP_272240005.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain SAAb472
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3453243..3464103

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QSG85_RS16080 (QSG85_16085)	secG	3453848..3454177 (-)	330	WP_000555570.1	preprotein translocase subunit SecG	-
QSG85_RS16085 (QSG85_16090)	tpiA	3454190..3454984 (-)	795	WP_032050671.1	triose-phosphate isomerase	-
QSG85_RS16090 (QSG85_16095)	pilB	3455275..3456987 (+)	1713	WP_001274987.1	type IV-A pilus assembly ATPase PilB	Machinery gene
QSG85_RS16095 (QSG85_16100)	pilC	3457017..3458243 (+)	1227	WP_317002393.1	type II secretion system F family protein	Machinery gene
QSG85_RS16100 (QSG85_16105)	pilD	3458243..3459103 (+)	861	WP_272240005.1	A24 family peptidase	Machinery gene
QSG85_RS16105 (QSG85_16110)	coaE	3459105..3459701 (+)	597	WP_000874125.1	dephospho-CoA kinase	-
QSG85_RS16110 (QSG85_16115)	-	3459698..3460612 (-)	915	WP_000075011.1	DMT family transporter	-
QSG85_RS16115 (QSG85_16120)	rlmB	3460648..3461397 (-)	750	WP_001118149.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
QSG85_RS16120 (QSG85_16125)	-	3461499..3461825 (-)	327	WP_000099685.1	pyrimidine/purine nucleoside phosphorylase	-
QSG85_RS16125 (QSG85_16130)	-	3461902..3463212 (-)	1311	WP_000753290.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32128.53 Da
• Isoelectric Point: 7.1041

>NTDB_id=845185 QSG85_RS16100 WP_272240005.1 3458243..3459103(+) (pilD) [Acinetobacter baumannii strain SAAb472]
MQDIIAYFIQNLTALYIAVALVSLCIGSFLNVVIYRTPRMMEQDWQQECQMLLNPEQPIIDHEKLTLSKPASSCPACQQP
IRWYQNIPVISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMVFGPTIQMLFGLVLTWLLIALTFIDFDTQLLPDR
FTLPLAALGLGINTFNIYTSPNSAIWGYLIGFLCLWIVYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
LGAIIGIILLKLRNDNQPFAFGPYITIAGWVAFLWGDQIMKIYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=845185 QSG85_RS16100 WP_272240005.1 3458243..3459103(+) (pilD) [Acinetobacter baumannii strain SAAb472]
ATGCAAGACATCATTGCGTATTTTATTCAAAACTTAACTGCACTTTATATTGCTGTTGCACTCGTGAGCCTATGTATCGG
TAGCTTTCTTAATGTAGTAATTTACCGCACGCCAAGAATGATGGAGCAAGATTGGCAGCAAGAATGCCAAATGTTACTCA
ATCCTGAGCAACCAATTATTGATCATGAGAAGTTAACTTTAAGTAAGCCTGCTTCATCGTGCCCTGCATGTCAGCAACCG
ATCCGTTGGTATCAAAATATTCCTGTTATAAGCTGGCTTGTGTTAAGAGGAAAATGTGGTCATTGCCAGCACCCGATTAG
TATTCGCTATCCAGCCATCGAACTACTCACTATGTTATGTTCATTAGTAGTCGTCATGGTGTTTGGTCCAACCATACAAA
TGCTTTTTGGACTCGTCCTCACATGGCTACTGATAGCCCTTACCTTTATTGATTTCGATACACAATTATTGCCTGATCGC
TTTACCCTACCTTTAGCTGCGCTCGGCTTAGGTATTAATACCTTTAATATTTATACCTCACCCAACTCAGCCATTTGGGG
TTATCTCATTGGTTTCCTATGTCTTTGGATTGTCTATTACTTATTTAAAGTGATCACTGGCAAAGAAGGTATGGGCTACG
GCGACTTTAAATTGCTTGCAGCATTAGGAGCATGGATGGGGCCATTGATGCTGCCGTTAATTGTGTTATTGTCATCGTTA
CTTGGCGCAATCATTGGCATCATTTTATTAAAATTAAGAAATGACAATCAGCCTTTTGCTTTTGGGCCATATATTACCAT
TGCTGGTTGGGTTGCCTTTTTATGGGGTGATCAGATTATGAAAATTTATTTGGGAGGTTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (22-128)

• Type IV leader peptidase family (Peptidase_A24) (138-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	98.601	100	0.986
pilD	Acinetobacter baumannii D1279779	98.252	100	0.983
pilD	Vibrio cholerae strain A1552	52.941	95.105	0.503
pilD	Vibrio campbellii strain DS40M4	51.661	94.755	0.49
pilD	Neisseria gonorrhoeae MS11	48.106	92.308	0.444