Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG   Type   Machinery gene
Locus tag   V2197_RS13765 Genome accession   NZ_CP143901
Coordinates   2912803..2914878 (-) Length   691 a.a.
NCBI ID   WP_003096624.1    Uniprot ID   A0A0H2ZJ60
Organism   Pseudomonas aeruginosa strain PA12_L1_25.22_ST207     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2907803..2919878
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V2197_RS13730 (V2197_13730) - 2907970..2908371 (+) 402 WP_003096637.1 heme-binding protein -
  V2197_RS13735 (V2197_13735) - 2908505..2908672 (+) 168 WP_003098330.1 rubredoxin -
  V2197_RS13740 (V2197_13740) - 2908856..2909023 (+) 168 WP_003098329.1 rubredoxin -
  V2197_RS13745 (V2197_13745) alkT 2909075..2910229 (+) 1155 WP_003098326.1 rubredoxin-NAD(+) reductase AlkT -
  V2197_RS13750 (V2197_13750) - 2910431..2910703 (+) 273 WP_003096630.1 HU family DNA-binding protein -
  V2197_RS13755 (V2197_13755) - 2910839..2911231 (+) 393 WP_033996191.1 hypothetical protein -
  V2197_RS13760 (V2197_13760) - 2911303..2912713 (-) 1411 Protein_2719 aminoacyl-tRNA deacylase and HDOD domain-containing protein -
  V2197_RS13765 (V2197_13765) recG 2912803..2914878 (-) 2076 WP_003096624.1 ATP-dependent DNA helicase RecG Machinery gene
  V2197_RS13770 (V2197_13770) oxyR 2914875..2915807 (-) 933 WP_003096622.1 oxidative stress transcriptional regulator OxyR -
  V2197_RS13775 (V2197_13775) - 2915945..2916796 (+) 852 WP_003096618.1 SDR family oxidoreductase -
  V2197_RS13780 (V2197_13780) - 2916796..2917596 (+) 801 WP_033996189.1 AraC family transcriptional regulator -
  V2197_RS13785 (V2197_13785) - 2917663..2918283 (+) 621 WP_003096613.1 LysE family translocator -
  V2197_RS13790 (V2197_13790) - 2918290..2919021 (-) 732 WP_003096611.1 hypothetical protein -
  V2197_RS13795 (V2197_13795) - 2919076..2919456 (-) 381 WP_003096609.1 RidA family protein -

Sequence


Protein


Download         Length: 691 a.a.        Molecular weight: 76178.88 Da        Isoelectric Point: 7.2591

>NTDB_id=845077 V2197_RS13765 WP_003096624.1 2912803..2914878(-) (recG) [Pseudomonas aeruginosa strain PA12_L1_25.22_ST207]
MTELSRVPVTALKGVGAALAEKLARVGLETLQDILFHLPLRYQDRTRVTAIGALRPGADAVVEGVVAGADVVMGRRRSLL
VRLQDGSGTLSLRFYHFSQAQKDGLKRGTHLRCYGEVRPGASGLEIYHPEYRALNGDEPIPVEQTLTPIYPTTEGLTQQR
LRQLSQQALAMLGPSSLPDWLPAELARDYQLGPLDQAIRYLHRPPPDADIEELAEGRHWAQLRLAFEELLTHQLSLQRLR
EAVRSQAAPRLPAASRLPKRFLANLGFQPTGAQRRVGAEIAYDLAQDEPMLRLVQGDVGAGKTVVAALAALQAIEAGYQV
ALMAPTEILAEQHFLNFSKWLQPLDIEVAWLAGKLKGKARAAALERIGDGAPMVVGTHALFQDEVKFKRLALAIIDEQHR
FGVQQRLALRQKGVDGRLCPHQLIMTATPIPRTLAMSAYADLDTSILDELPPGRTPVNTVLVADSRRIEVIERVRAACRE
GRQAYWVCTLIEESEELTCQAAETTYEELSSALGELRVGLIHGRMKPADKAVVMEAFKEGMLQLLVATTVIEVGVDVPNA
SLMIIENPERLGLAQLHQLRGRVGRGSAASHCVLLYHPPLSQIGRERLGIMRETSDGFVIAEKDLELRGPGEMLGTRQTG
LLQFKVADLMRDADLLPAVRDAAQSLLAHWPQHVSPLLERWLRHGQQYGQV

Nucleotide


Download         Length: 2076 bp        

>NTDB_id=845077 V2197_RS13765 WP_003096624.1 2912803..2914878(-) (recG) [Pseudomonas aeruginosa strain PA12_L1_25.22_ST207]
ATGACCGAGCTGTCCAGGGTCCCGGTCACCGCGCTAAAGGGCGTAGGCGCCGCGCTGGCGGAGAAGCTCGCTCGGGTAGG
CCTGGAAACCCTGCAGGACATCCTGTTCCACCTGCCCCTGCGCTACCAGGACCGTACCCGCGTCACCGCCATCGGCGCCC
TGCGGCCAGGGGCCGACGCGGTGGTCGAGGGCGTGGTGGCCGGCGCCGACGTGGTGATGGGGCGCCGCCGCAGCCTGCTG
GTGCGCCTGCAGGACGGCAGCGGCACCCTGAGCCTGCGCTTCTACCATTTCAGCCAGGCGCAGAAGGACGGCCTGAAGCG
CGGCACCCACCTGCGCTGCTACGGCGAAGTCCGGCCGGGTGCATCGGGCCTGGAGATCTACCATCCGGAATACCGCGCGC
TGAACGGCGACGAACCGATTCCGGTGGAGCAGACCCTGACGCCGATCTACCCGACTACCGAAGGACTCACCCAGCAGCGC
CTGCGCCAGTTGAGCCAACAGGCCCTGGCCATGCTCGGTCCCAGCAGCCTGCCCGACTGGCTACCGGCGGAACTGGCCCG
CGATTATCAACTTGGCCCGCTCGATCAGGCGATCCGCTACCTGCACCGGCCGCCGCCGGATGCCGACATCGAGGAACTGG
CCGAAGGCCGGCACTGGGCGCAGTTGCGCCTGGCCTTCGAAGAACTGCTGACCCACCAGTTATCCCTGCAGCGCCTGCGC
GAAGCCGTGCGTTCGCAGGCAGCGCCGCGCTTGCCGGCGGCCAGCCGCTTGCCGAAACGCTTCCTTGCCAACCTCGGCTT
CCAGCCAACCGGCGCGCAACGCCGGGTCGGCGCGGAGATCGCCTACGACCTGGCCCAGGACGAACCGATGCTGCGCCTGG
TGCAAGGCGACGTCGGCGCCGGCAAGACCGTGGTCGCCGCCCTCGCCGCCCTGCAAGCCATAGAGGCCGGCTACCAGGTG
GCGCTGATGGCGCCGACCGAGATCCTCGCCGAGCAGCATTTCCTCAACTTCAGCAAGTGGCTCCAGCCGCTGGACATCGA
AGTCGCCTGGCTGGCCGGCAAGCTCAAGGGCAAGGCCCGCGCGGCGGCACTGGAACGCATCGGCGACGGCGCGCCGATGG
TGGTCGGCACCCACGCGCTGTTCCAGGATGAAGTGAAATTCAAGCGCCTTGCACTGGCGATCATCGACGAACAGCACCGC
TTCGGCGTGCAGCAGCGCCTGGCCCTGCGCCAGAAGGGCGTGGACGGCAGGCTCTGCCCGCACCAGTTGATCATGACCGC
CACGCCGATCCCGCGGACCCTGGCGATGAGCGCCTATGCCGACCTCGACACCTCGATCCTCGACGAGCTGCCGCCCGGGC
GTACCCCGGTGAATACCGTGCTGGTGGCCGACAGCCGCCGTATCGAGGTGATCGAGCGAGTCCGCGCGGCTTGCCGCGAA
GGGCGCCAGGCCTACTGGGTGTGTACCCTGATCGAAGAGTCCGAGGAGCTTACCTGCCAGGCCGCCGAGACCACCTACGA
AGAGCTTTCCTCGGCGCTGGGCGAACTGCGTGTCGGCCTGATCCACGGGCGCATGAAGCCGGCGGACAAGGCCGTGGTGA
TGGAGGCCTTCAAGGAAGGCATGTTGCAACTGCTGGTGGCGACCACGGTGATCGAGGTCGGCGTCGACGTGCCCAACGCC
AGTCTGATGATCATCGAGAACCCCGAGCGCCTTGGCCTGGCCCAACTGCACCAGTTGCGCGGCCGGGTTGGCCGGGGCAG
CGCCGCCAGCCACTGCGTGCTGCTCTACCACCCACCGCTGTCGCAGATCGGCCGCGAGCGGCTGGGCATCATGCGCGAAA
CCAGCGACGGCTTCGTCATCGCCGAGAAGGACCTGGAATTGCGCGGCCCCGGCGAAATGCTCGGCACCCGCCAGACCGGC
CTGCTGCAATTCAAGGTCGCCGACCTGATGCGCGACGCAGACCTGCTGCCGGCGGTCCGCGATGCCGCCCAATCCCTCCT
GGCGCACTGGCCGCAGCATGTCAGCCCGCTGCTCGAACGGTGGTTGCGCCACGGCCAGCAATACGGTCAAGTGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZJ60

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

50.373

97.106

0.489

  recG/mmsA Streptococcus pneumoniae R6

40.868

96.671

0.395

  recG/mmsA Streptococcus pneumoniae R36A

40.868

96.671

0.395

  recG Bacillus subtilis subsp. subtilis str. 168

40.356

97.54

0.394