Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | QRS93_RS00700 | Genome accession | NZ_CP127842 |
| Coordinates | 117572..118525 (+) | Length | 317 a.a. |
| NCBI ID | WP_003060701.1 | Uniprot ID | A0A9X8T146 |
| Organism | Streptococcus dysgalactiae subsp. equisimilis strain TPCH-F37 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 112572..123525
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QRS93_RS00660 (QRS93_00660) | - | 113398..113763 (+) | 366 | WP_003055257.1 | DUF1033 family protein | - |
| QRS93_RS00665 (QRS93_00665) | comGA/cglA | 113844..114785 (+) | 942 | WP_015016543.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| QRS93_RS00670 (QRS93_00670) | comYB | 114721..115752 (+) | 1032 | WP_042357807.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| QRS93_RS00675 (QRS93_00675) | comYC | 115754..116080 (+) | 327 | WP_003055259.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| QRS93_RS00680 (QRS93_00680) | comGD | 116055..116483 (+) | 429 | WP_041788719.1 | competence type IV pilus minor pilin ComGD | - |
| QRS93_RS00685 (QRS93_00685) | comGE | 116491..116736 (+) | 246 | WP_003058569.1 | competence type IV pilus minor pilin ComGE | - |
| QRS93_RS00690 (QRS93_00690) | comGF | 116717..117157 (+) | 441 | WP_003061780.1 | competence type IV pilus minor pilin ComGF | - |
| QRS93_RS00695 (QRS93_00695) | comGG | 117186..117509 (+) | 324 | WP_227985720.1 | competence type IV pilus minor pilin ComGG | - |
| QRS93_RS00700 (QRS93_00700) | comYH | 117572..118525 (+) | 954 | WP_003060701.1 | class I SAM-dependent methyltransferase | Machinery gene |
| QRS93_RS00705 (QRS93_00705) | - | 118584..119780 (+) | 1197 | WP_003058485.1 | acetate kinase | - |
| QRS93_RS00710 (QRS93_00710) | - | 120086..120292 (+) | 207 | WP_003058508.1 | helix-turn-helix transcriptional regulator | - |
| QRS93_RS00715 (QRS93_00715) | - | 120395..121075 (+) | 681 | WP_003060329.1 | type II CAAX endopeptidase family protein | - |
| QRS93_RS00720 (QRS93_00720) | - | 121093..121530 (+) | 438 | WP_012766452.1 | hypothetical protein | - |
| QRS93_RS00725 (QRS93_00725) | proC | 121670..122446 (-) | 777 | WP_003058540.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36049.01 Da Isoelectric Point: 4.7910
>NTDB_id=844597 QRS93_RS00700 WP_003060701.1 117572..118525(+) (comYH) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-F37]
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=844597 QRS93_RS00700 WP_003060701.1 117572..118525(+) (comYH) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-F37]
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTGCCCAGAACATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGGAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACACCAGATGCTATTGGTTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
CAAAGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGAATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTTA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGTTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGTCAATTGTTGAAAAATTGGTTAACTGGCTATGCCCAGGTAGTGGCCTTGATTACTCTACCAGATTCTATATTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGATGGAAACCTTTGTTTATCCTATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTGCCCAGAACATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGGAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACACCAGATGCTATTGGTTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
CAAAGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGAATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTTA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGTTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGTCAATTGTTGAAAAATTGGTTAACTGGCTATGCCCAGGTAGTGGCCTTGATTACTCTACCAGATTCTATATTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGATGGAAACCTTTGTTTATCCTATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
66.456 |
99.685 |
0.662 |
| comYH | Streptococcus mutans UA159 |
66.139 |
99.685 |
0.659 |