Detailed information NTG0844574

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: VZG88_RS05300
• Genome accession: NZ_CP143871
• Coordinates: 1074441..1077452 (-)
• Length: 1003 a.a.
• NCBI ID: WP_208679032.1
• Uniprot ID: -
• Organism: Synechococcus elongatus IITB6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1069441..1082452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VZG88_RS05280 (VZG88_05280)	-	1070318..1070749 (-)	432	WP_208679033.1	hypothetical protein	-
VZG88_RS05285 (VZG88_05285)	-	1070913..1071623 (-)	711	WP_208672632.1	PHP domain-containing protein	-
VZG88_RS05290 (VZG88_05290)	-	1072301..1073116 (-)	816	WP_338438639.1	D-hexose-6-phosphate mutarotase	-
VZG88_RS05295 (VZG88_05295)	pilT	1073159..1074274 (-)	1116	WP_208672636.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
VZG88_RS05300 (VZG88_05300)	uvrA	1074441..1077452 (-)	3012	WP_208679032.1	excinuclease ABC subunit UvrA	Machinery gene
VZG88_RS05305 (VZG88_05305)	-	1077579..1077740 (+)	162	WP_208672638.1	hypothetical protein	-
VZG88_RS05310 (VZG88_05310)	-	1077814..1078392 (-)	579	WP_228383277.1	GAF domain-containing protein	-
VZG88_RS05315 (VZG88_05315)	-	1078609..1078827 (+)	219	WP_208672641.1	chlorophyll a/b-binding protein	-
VZG88_RS05320 (VZG88_05320)	-	1079012..1079356 (+)	345	WP_208679031.1	hypothetical protein	-
VZG88_RS05325 (VZG88_05325)	hisIE	1079412..1080047 (+)	636	WP_208679030.1	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	-
VZG88_RS05330 (VZG88_05330)	mtnC	1080058..1080774 (-)	717	WP_208679029.1	acireductone synthase	-
VZG88_RS05335 (VZG88_05335)	mtnB	1080783..1081403 (-)	621	WP_208679028.1	methylthioribulose 1-phosphate dehydratase	-

Sequence

Protein

• Length: 1003 a.a.
• Molecular weight: 109771.71 Da
• Isoelectric Point: 6.7802

>NTDB_id=844574 VZG88_RS05300 WP_208679032.1 1074441..1077452(-) (uvrA) [Synechococcus elongatus IITB6]
MPKRASVEPSSDLAHRNGNQPAAETDQIRVRGARQHNLQNLDLDLPRNQLIVFTGVSGSGKSSLAFDTIFAEGQRRYVES
LSAYARQFLGQVDKPDVDAIEGLSPAISIDQKSTSHNPRSTVGTVTEIYDYLRLLFGRAGAPHCPHCDRSIAPQTIDQMV
DRLAELPDRSRFQILAPVVRGKKGTHKKLLSSLAAEGFVRVRINGEVRELSDSIELDKNHAHTIEIVVDRLVQKEGIQER
LVDSLTTCLRRAEGIAVIDVLPSDRGSVVTLPTELAASHAAETKAAYGSPASGYELVFSENFACPEHGAVMEELSPRLFS
FNSPYGACSHCHGLGSLRTFSPDLVVPDPSLPVYAAIAPWSEKDHSYYFNLLCGVAEASGFEISDRWQDLTPDQQQAILY
GSREAIAVETESRFRDRQVYHRPFEGVIPILERQYRETSSEVYKQKLEKYLVDQTCEVCHGLRLKPESLAVRIGPYRITD
LTSVSVRDCLSKIEALIGADGRSPLLTARQMQIGDLVLREIQARLRFLLDVGLDYLTLDRPAMTLSGGEAQRIRLATQIG
AGLTGVLYVLDEPSIGLHQRDNDRLLNTLIRLRDLGNTLIVVEHDEDTIRAADHLVDIGPGAGVHGGRIVAQGNLKQLLT
AEDSLTGAYLSGRRRIATPASRREGNGRRLQLQGANRNNLQNLDVEIPLGKLVCVTGVSGSGKSTLVNELLHPALEHSLG
LKVPFPKGLAALKGTKAIDKVIVIDQSPIGRTPRSNPATYTGAFDPIRQVFAATTEAKARGYQPGQFSFNVKGGRCEACG
GQGVNVIEMNFLPDVYVQCDVCKGARYNRETLQVKYKGKTIADVLNMTVEEAAQFFENIPQASSRLQTLVDVGLGYVRLG
QPAPTLSGGEAQRVKLATELARRATGKTLYLIDEPTTGLSFYDVHKLLDVMQRLVDKGNSIVVIEHNLDVIRCADWIIDL
GPEGGDRGGEIVVCGEPETVAMHAHSHTGRYLAQVLAQHPPGQ

Nucleotide

• Length: 3012 bp

>NTDB_id=844574 VZG88_RS05300 WP_208679032.1 1074441..1077452(-) (uvrA) [Synechococcus elongatus IITB6]
ATGCCCAAGCGCGCTTCTGTTGAGCCTTCCTCTGATCTGGCTCATCGCAATGGCAATCAACCAGCAGCTGAGACAGACCA
AATTCGAGTTCGGGGCGCGCGGCAACATAATCTGCAGAACCTTGACCTCGATCTACCGCGCAACCAGCTAATTGTGTTTA
CGGGTGTGAGCGGTTCGGGTAAGTCATCCCTTGCCTTCGACACAATTTTTGCGGAAGGCCAACGCCGCTACGTCGAGTCA
CTATCTGCTTACGCTCGGCAGTTCCTTGGCCAAGTCGATAAGCCCGATGTCGATGCGATTGAGGGCTTGAGCCCAGCCAT
CTCCATTGACCAAAAATCCACTTCGCACAACCCACGATCGACGGTTGGCACGGTCACGGAAATCTACGATTACCTGCGGT
TGTTGTTTGGGCGAGCTGGTGCGCCCCACTGTCCCCATTGCGATCGCTCGATCGCGCCTCAAACGATCGATCAAATGGTC
GATCGCCTTGCAGAACTACCCGATCGCAGCCGCTTTCAAATCTTGGCGCCGGTGGTTCGCGGTAAAAAAGGAACCCATAA
AAAACTGCTTTCTAGCCTCGCGGCAGAAGGCTTTGTGCGGGTGCGGATCAACGGTGAAGTGCGGGAACTCAGTGACAGTA
TTGAGCTGGATAAAAACCACGCCCACACCATCGAAATTGTGGTCGATCGCCTTGTTCAAAAAGAGGGAATTCAAGAGCGA
CTCGTTGATTCACTCACCACCTGTCTCCGTCGTGCCGAAGGCATTGCTGTGATCGATGTCTTGCCGAGCGATCGCGGCTC
GGTCGTAACCTTGCCGACGGAGCTAGCAGCTAGCCACGCAGCCGAAACAAAAGCTGCCTATGGCAGTCCTGCCAGTGGCT
ATGAACTCGTCTTTTCCGAAAATTTTGCTTGCCCCGAGCATGGCGCTGTGATGGAAGAACTGTCGCCGCGCCTCTTTTCC
TTTAACTCACCCTACGGTGCCTGCTCCCATTGCCACGGGCTGGGGAGCCTACGGACGTTTTCGCCCGATCTGGTCGTTCC
CGATCCCAGCCTGCCGGTCTATGCCGCGATCGCGCCTTGGTCGGAAAAAGATCACAGCTACTACTTCAATCTGCTCTGCG
GCGTGGCCGAGGCCAGTGGCTTCGAAATCAGCGATCGCTGGCAGGATTTGACCCCTGATCAACAGCAGGCGATTCTCTAC
GGCAGCCGTGAAGCGATCGCGGTTGAAACCGAATCCCGCTTCCGCGATCGTCAGGTTTACCATCGCCCCTTTGAGGGGGT
GATTCCGATCCTGGAGCGTCAGTACCGAGAAACCAGTTCCGAAGTCTATAAACAAAAGCTCGAAAAATATCTCGTCGATC
AAACCTGCGAAGTTTGCCACGGTTTACGGCTCAAACCGGAATCCTTAGCAGTACGAATTGGCCCCTATCGGATCACTGAT
CTCACCAGTGTTTCAGTACGGGACTGCCTGAGCAAAATTGAAGCTTTAATCGGTGCTGACGGGCGATCGCCCCTGTTGAC
AGCTCGCCAAATGCAGATCGGGGATTTGGTGCTGCGCGAAATTCAGGCTCGCCTGCGCTTCTTGCTCGACGTGGGACTCG
ACTACCTGACCCTCGATCGCCCGGCCATGACTCTCTCGGGTGGTGAGGCCCAGCGTATTCGCCTGGCTACACAAATTGGG
GCGGGTCTGACCGGAGTGCTCTACGTCTTGGATGAGCCCAGTATTGGGCTGCATCAACGTGATAACGATCGCCTACTCAA
TACCCTGATCCGCCTGCGGGATCTCGGTAACACCCTGATTGTGGTTGAGCATGACGAAGATACGATTCGTGCAGCCGACC
ACCTGGTTGATATTGGACCTGGAGCAGGTGTGCATGGGGGTCGTATCGTTGCCCAAGGCAATTTAAAGCAACTGCTGACG
GCTGAAGACTCGTTGACGGGTGCTTATCTCTCAGGCCGCCGCCGTATTGCCACTCCAGCGAGCCGTCGTGAGGGTAATGG
TCGCCGTCTGCAGCTCCAAGGTGCCAATCGTAACAATCTCCAAAACCTTGATGTTGAGATTCCCCTCGGCAAACTGGTCT
GTGTCACGGGCGTGAGTGGCTCCGGCAAATCCACGCTAGTCAATGAACTCCTACATCCAGCCCTCGAGCACAGTCTGGGG
CTGAAGGTTCCTTTTCCTAAAGGCCTGGCCGCGCTGAAAGGCACAAAAGCGATCGACAAGGTGATCGTGATTGATCAATC
GCCGATTGGTCGTACCCCGCGATCAAATCCGGCGACCTATACCGGTGCCTTTGATCCGATTCGGCAGGTGTTTGCTGCAA
CGACGGAAGCAAAAGCACGAGGCTATCAGCCGGGGCAGTTTTCCTTCAATGTCAAAGGCGGTCGCTGTGAAGCCTGTGGT
GGGCAAGGCGTCAATGTCATCGAGATGAATTTTCTGCCCGATGTCTATGTCCAGTGCGATGTCTGCAAAGGCGCTCGCTA
TAACCGTGAAACGCTGCAGGTGAAGTACAAAGGCAAGACAATCGCTGACGTGCTCAACATGACCGTCGAAGAGGCGGCGC
AGTTTTTCGAAAACATTCCTCAAGCCAGTAGCCGCCTGCAGACCTTGGTGGATGTGGGTCTGGGCTATGTGCGTCTCGGT
CAGCCTGCTCCAACCCTCTCAGGTGGTGAAGCCCAACGGGTCAAACTAGCAACGGAACTGGCGCGTCGGGCAACTGGTAA
AACGCTCTATCTGATTGATGAACCGACCACCGGTCTCTCTTTCTACGATGTCCACAAGTTGCTGGATGTGATGCAGCGCC
TCGTGGATAAGGGCAATTCGATCGTGGTGATTGAGCACAACTTGGATGTGATTCGCTGTGCTGACTGGATCATTGATCTC
GGGCCAGAAGGGGGCGATCGCGGCGGCGAGATTGTTGTTTGCGGGGAGCCAGAGACTGTAGCAATGCATGCTCACTCCCA
CACAGGGCGCTATCTTGCTCAAGTCTTAGCCCAGCATCCTCCGGGGCAGTAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (154-260)

• UvrA DNA-binding domain (UvrA_DNA-bind) (342-449)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	54.115	96.909	0.524
uvrA	Streptococcus pneumoniae TIGR4	54.115	96.909	0.524
uvrA	Streptococcus pneumoniae D39	54.115	96.909	0.524