Detailed information NTG0844546

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: VZH39_RS10320
• Genome accession: NZ_CP143862
• Coordinates: 2078282..2079721 (-)
• Length: 479 a.a.
• NCBI ID: WP_338429774.1
• Uniprot ID: -
• Organism: Synechococcus elongatus IITB8
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2073282..2084721

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VZH39_RS10295 (VZH39_10295)	mreD	2074674..2075357 (-)	684	WP_228383154.1	rod shape-determining protein MreD	-
VZH39_RS10300 (VZH39_10300)	mreC	2075318..2076067 (-)	750	WP_208678351.1	rod shape-determining protein MreC	-
VZH39_RS10305 (VZH39_10305)	-	2076092..2077093 (-)	1002	WP_275937699.1	rod shape-determining protein	-
VZH39_RS10310 (VZH39_10310)	ssb	2077322..2077684 (+)	363	WP_208675098.1	single-stranded DNA-binding protein	Machinery gene
VZH39_RS10315 (VZH39_10315)	-	2077811..2078242 (+)	432	WP_338429773.1	GNAT family N-acetyltransferase	-
VZH39_RS10320 (VZH39_10320)	comA	2078282..2079721 (-)	1440	WP_338429774.1	phospholipase D-like domain-containing protein	Machinery gene
VZH39_RS10325 (VZH39_10325)	-	2080028..2082931 (+)	2904	WP_338429775.1	DNA methyltransferase	-
VZH39_RS10330 (VZH39_10330)	-	2083016..2084104 (+)	1089	WP_338429776.1	potassium channel protein	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 52660.10 Da
• Isoelectric Point: 5.6977

>NTDB_id=844546 VZH39_RS10320 WP_338429774.1 2078282..2079721(-) (comA) [Synechococcus elongatus IITB8]
MKPGVIALLLGLLTACQAPLAQILPVAGGGSTRWDANAPLQVAFNHNPEQRFTDGLGRDREGEDLEGRLLASLEQATTSI
DVAVQEIQLPRLATVLAQKHQAGIPVRVILENQYRQPWSQRLSAPMSDRDRQRLENYRQLADRNGDGQLSPAEIATGDAV
VILERAGVPILDDTADGSKGSGLMHHKFAIIDRQWVVTGSANWTASDFFGDPGRPASRGNANHLLWFRSPAIAATFQTEF
DLMWGDGPGNLPDSLFGRAKPPRSPQSVRVGQTRVLVQFSPSSLRLPWEQSTNGTIARYLTQAQQQVDLALFVFSEQAIA
DILEARSQQGTQIRLLIDPGFAYRPYSELLDAFGLSLADRDCRVEPNNRPWATPLRTAGVPRLAPGDTLHHKFAVIDRQR
VLTGSHNWSAAANENNDETFLVIEDTTLAAQFSAEFERLYASAFLGIPPALQRRVNEANRRCGSRLETAPSRDSAEPED

Nucleotide

• Length: 1440 bp

>NTDB_id=844546 VZH39_RS10320 WP_338429774.1 2078282..2079721(-) (comA) [Synechococcus elongatus IITB8]
ATGAAGCCTGGAGTGATCGCCCTGCTGCTAGGGCTACTAACCGCCTGCCAAGCCCCGCTCGCGCAGATTCTCCCCGTTGC
TGGCGGTGGCTCCACTCGTTGGGATGCCAATGCACCCCTCCAGGTTGCGTTTAATCACAATCCAGAACAGCGATTTACCG
ATGGCTTAGGGCGCGATCGTGAGGGAGAAGATCTGGAAGGACGACTGCTTGCCAGCTTGGAACAGGCGACAACCTCAATC
GATGTCGCGGTTCAGGAAATCCAGCTTCCCCGACTGGCAACAGTCTTGGCCCAAAAACACCAGGCGGGCATCCCGGTTCG
CGTCATCTTGGAAAACCAATATCGCCAGCCCTGGAGTCAGCGCCTCTCTGCCCCAATGAGCGATCGCGATCGGCAACGGC
TGGAGAACTACCGGCAACTGGCCGATCGCAATGGAGATGGACAGCTCAGCCCAGCTGAAATTGCCACGGGAGATGCTGTG
GTCATCCTTGAGCGTGCTGGGGTGCCGATCCTGGATGACACCGCTGATGGCAGCAAAGGCAGCGGCCTCATGCACCACAA
GTTTGCGATCATCGATCGCCAATGGGTGGTCACCGGTTCAGCCAACTGGACCGCCAGCGATTTCTTTGGTGATCCGGGTC
GACCGGCCAGCCGAGGCAATGCCAATCATCTGCTTTGGTTCCGAAGCCCTGCGATCGCCGCTACCTTCCAAACAGAATTT
GACCTCATGTGGGGAGATGGCCCCGGTAACTTGCCTGACAGTCTGTTTGGTCGGGCGAAGCCGCCGCGATCGCCGCAATC
AGTGCGCGTAGGTCAGACCCGTGTCCTGGTGCAGTTTTCGCCCTCCAGCCTGCGATTGCCTTGGGAGCAGAGCACCAATG
GCACGATCGCTCGTTACCTCACGCAAGCTCAACAGCAGGTCGATCTGGCGCTCTTTGTTTTTTCCGAGCAGGCGATCGCG
GATATTTTGGAAGCGCGATCGCAGCAAGGCACCCAGATTCGCTTGCTGATTGACCCTGGCTTTGCCTATCGGCCCTACAG
CGAACTCTTGGATGCGTTTGGCCTCAGCCTTGCCGATCGCGACTGTCGTGTTGAGCCTAACAATCGCCCTTGGGCAACAC
CACTGAGGACTGCCGGAGTGCCGCGGTTGGCGCCGGGCGATACGTTGCATCACAAGTTCGCCGTGATCGATCGCCAGCGT
GTGCTGACCGGATCCCACAACTGGAGTGCAGCGGCAAACGAAAACAACGATGAAACCTTTCTGGTCATTGAGGATACAAC
CCTGGCAGCTCAATTCAGTGCTGAATTTGAGCGACTCTATGCCAGTGCGTTCTTAGGAATCCCGCCAGCTCTACAACGGC
GAGTCAACGAGGCCAATCGCCGCTGTGGGAGTCGATTGGAAACAGCACCCAGCCGAGATTCCGCAGAGCCGGAAGACTAA

Domains

Predicted by InterProScan.

• PLD-like domain (PLDc_2) (298-439)

• PLD-like domain (PLDc_2) (70-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Synechocystis sp. PCC 6803	45.86	98.33	0.451