Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | JMH49_RS10510 | Genome accession | NZ_AP024270 |
| Coordinates | 1948085..1948393 (+) | Length | 102 a.a. |
| NCBI ID | WP_024119555.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain HB5018 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1943085..1953393
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMH49_RS10480 (TthHB5018_20780) | - | 1944168..1944632 (+) | 465 | WP_201351017.1 | hypothetical protein | - |
| JMH49_RS10485 (TthHB5018_20790) | pfkA | 1944609..1945577 (-) | 969 | WP_011173968.1 | 6-phosphofructokinase | - |
| JMH49_RS10490 (TthHB5018_20800) | rsmI | 1945574..1946368 (-) | 795 | WP_201351018.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| JMH49_RS10495 (TthHB5018_20810) | - | 1946370..1946864 (-) | 495 | WP_011173970.1 | hypothetical protein | - |
| JMH49_RS10500 (TthHB5018_20820) | - | 1946928..1947455 (-) | 528 | WP_011173971.1 | inorganic diphosphatase | - |
| JMH49_RS14250 | - | 1947488..1948112 (+) | 625 | Protein_2056 | YcxB family protein | - |
| JMH49_RS10510 (TthHB5018_20850) | comEA | 1948085..1948393 (+) | 309 | WP_024119555.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| JMH49_RS10515 (TthHB5018_20860) | comA/comEC | 1948390..1950423 (+) | 2034 | WP_201351019.1 | ComEC/Rec2 family competence protein | Machinery gene |
| JMH49_RS10520 (TthHB5018_20870) | - | 1950411..1951220 (-) | 810 | WP_011173975.1 | ParB/RepB/Spo0J family partition protein | - |
| JMH49_RS10525 (TthHB5018_20880) | soj | 1951204..1951953 (-) | 750 | WP_201351020.1 | chromosome-partitioning ATPase Soj | - |
| JMH49_RS10530 (TthHB5018_20890) | rsmG | 1951947..1952696 (-) | 750 | WP_024119551.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 10947.23 Da Isoelectric Point: 10.3435
>NTDB_id=84450 JMH49_RS10510 WP_024119555.1 1948085..1948393(+) (comEA) [Thermus thermophilus strain HB5018]
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
Nucleotide
Download Length: 309 bp
>NTDB_id=84450 JMH49_RS10510 WP_024119555.1 1948085..1948393(+) (comEA) [Thermus thermophilus strain HB5018]
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
100 |
100 |
1 |
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
39.815 |
100 |
0.422 |