Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSY31_RS02035 Genome accession   NZ_CP127834
Coordinates   404956..405909 (+) Length   317 a.a.
NCBI ID   WP_059366593.1    Uniprot ID   -
Organism   Bacillus velezensis strain Ag109     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 399956..410909
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSY31_RS02010 (NSY31_02010) - 400002..401435 (+) 1434 WP_162992601.1 HAMP domain-containing sensor histidine kinase -
  NSY31_RS02015 (NSY31_02015) rapC 401588..402736 (+) 1149 WP_098080978.1 Rap family tetratricopeptide repeat protein Regulator
  NSY31_RS02020 (NSY31_02020) phrC 402720..402839 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  NSY31_RS02025 (NSY31_02025) - 402988..403083 (-) 96 WP_021495118.1 YjcZ family sporulation protein -
  NSY31_RS02030 (NSY31_02030) - 403178..404542 (-) 1365 WP_080130839.1 aspartate kinase -
  NSY31_RS02035 (NSY31_02035) ceuB 404956..405909 (+) 954 WP_059366593.1 ABC transporter permease Machinery gene
  NSY31_RS02040 (NSY31_02040) - 405899..406846 (+) 948 WP_007410274.1 iron chelate uptake ABC transporter family permease subunit -
  NSY31_RS02045 (NSY31_02045) - 406840..407598 (+) 759 WP_063096189.1 ABC transporter ATP-binding protein -
  NSY31_RS02050 (NSY31_02050) - 407620..408564 (+) 945 WP_007410275.1 siderophore ABC transporter substrate-binding protein -
  NSY31_RS02055 (NSY31_02055) - 408606..410030 (-) 1425 WP_098080980.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=844499 NSY31_RS02035 WP_059366593.1 404956..405909(+) (ceuB) [Bacillus velezensis strain Ag109]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=844499 NSY31_RS02035 WP_059366593.1 404956..405909(+) (ceuB) [Bacillus velezensis strain Ag109]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGTCGGTATGAGCTTTTATATCTGAGTATCCC
GCTTTTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCGCTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536