Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   NSY31_RS01850 Genome accession   NZ_CP127834
Coordinates   360785..360949 (+) Length   54 a.a.
NCBI ID   WP_269461319.1    Uniprot ID   -
Organism   Bacillus velezensis strain Ag109     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 355785..365949
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSY31_RS19605 - 358250..358540 (+) 291 WP_349816683.1 hypothetical protein -
  NSY31_RS01845 (NSY31_01845) - 358618..360720 (+) 2103 Protein_325 amino acid adenylation domain-containing protein -
  NSY31_RS01850 (NSY31_01850) comS 360785..360949 (+) 165 WP_269461319.1 competence protein ComS Regulator
  NSY31_RS01855 (NSY31_01855) srfAB 360871..365523 (+) 4653 Protein_327 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 54 a.a.        Molecular weight: 6184.17 Da        Isoelectric Point: 12.0559

>NTDB_id=844496 NSY31_RS01850 WP_269461319.1 360785..360949(+) (comS) [Bacillus velezensis strain Ag109]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRQARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=844496 NSY31_RS01850 WP_269461319.1 360785..360949(+) (comS) [Bacillus velezensis strain Ag109]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCAAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains


Predicted by InterproScan.

(9-52)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

63.636

81.481

0.519