Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QLQ02_RS16315 Genome accession   NZ_CP127833
Coordinates   3149138..3149941 (+) Length   267 a.a.
NCBI ID   WP_010334880.1    Uniprot ID   A0A9Q4HNW6
Organism   Bacillus mojavensis strain KRS009     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3144138..3154941
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ02_RS16300 argR 3145010..3145459 (+) 450 WP_010334883.1 arginine repressor ArgR -
  QLQ02_RS16305 recN 3145495..3147225 (+) 1731 WP_286058330.1 DNA repair protein RecN Machinery gene
  QLQ02_RS16310 spoIVB 3147585..3148862 (+) 1278 WP_268505001.1 SpoIVB peptidase -
  QLQ02_RS16315 spo0A 3149138..3149941 (+) 804 WP_010334880.1 sporulation transcription factor Spo0A Regulator
  QLQ02_RS16320 - 3150523..3151641 (-) 1119 WP_268449553.1 NADH-dependent flavin oxidoreductase -
  QLQ02_RS21290 - 3151714..3151848 (-) 135 WP_168748207.1 hypothetical protein -
  QLQ02_RS16325 - 3152176..3152469 (+) 294 WP_032731307.1 hypothetical protein -
  QLQ02_RS16330 - 3152492..3153112 (+) 621 WP_229146906.1 N-acetylmuramoyl-L-alanine amidase -
  QLQ02_RS16335 - 3153202..3153945 (+) 744 WP_268445922.1 glycerophosphodiester phosphodiesterase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29719.20 Da        Isoelectric Point: 6.3913

>NTDB_id=844476 QLQ02_RS16315 WP_010334880.1 3149138..3149941(+) (spo0A) [Bacillus mojavensis strain KRS009]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKRKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=844476 QLQ02_RS16315 WP_010334880.1 3149138..3149941(+) (spo0A) [Bacillus mojavensis strain KRS009]
GTGGAGAAAATTAAAGTTTGTGTTGCTGACGATAATCGAGAGCTGGTAAGCCTGTTGAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTCATCGGAGTTGCTTATAACGGACAGGAATGTCTGTCGCTATTTAAAGAAAAAGATCCTGATGTGCTCG
TCTTGGACATTATTATGCCGCATTTGGACGGACTTGCTGTTTTAGAGCGACTGAGAGAATCAGATCTGAAAAAACAGCCA
AACGTCATCATGCTGACAGCCTTCGGACAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGAGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATTCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGCGCGC
CGTCATCACAAAGCAGCATTATACGCAGCAGCCAGCCTGAACCAAAAAGGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCTGCACATATTAAAGGCTATCTCTATCTGCGTGAAGCGATCTCAATGGTGTATAACGACAT
CGAACTGCTCGGCAGTATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTCAATACAACCGCTAGCCGTGTAGAGA
GAGCGATCCGCCACGCAATTGAAGTGGCATGGAGCAGAGGGAATATTGATTCCATATCCTCATTGTTCGGTTATACAGTC
AGCATGACGAAGGCAAAACCTACAAATTCAGAGTTCATTGCGATGGTTGCGGATAAGCTGAGATTAGAACATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

99.625

100

0.996