Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   QLQ02_RS16305 Genome accession   NZ_CP127833
Coordinates   3145495..3147225 (+) Length   576 a.a.
NCBI ID   WP_286058330.1    Uniprot ID   -
Organism   Bacillus mojavensis strain KRS009     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3140495..3152225
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ02_RS16280 - 3140857..3141111 (+) 255 WP_010334887.1 exodeoxyribonuclease VII small subunit -
  QLQ02_RS16285 - 3141101..3141991 (+) 891 WP_010334886.1 polyprenyl synthetase family protein -
  QLQ02_RS16290 dxs 3142170..3144071 (+) 1902 WP_286058328.1 1-deoxy-D-xylulose-5-phosphate synthase -
  QLQ02_RS16295 - 3144068..3144913 (+) 846 WP_286058329.1 TlyA family RNA methyltransferase -
  QLQ02_RS16300 argR 3145010..3145459 (+) 450 WP_010334883.1 arginine repressor ArgR -
  QLQ02_RS16305 recN 3145495..3147225 (+) 1731 WP_286058330.1 DNA repair protein RecN Machinery gene
  QLQ02_RS16310 spoIVB 3147585..3148862 (+) 1278 WP_268505001.1 SpoIVB peptidase -
  QLQ02_RS16315 spo0A 3149138..3149941 (+) 804 WP_010334880.1 sporulation transcription factor Spo0A Regulator
  QLQ02_RS16320 - 3150523..3151641 (-) 1119 WP_268449553.1 NADH-dependent flavin oxidoreductase -
  QLQ02_RS21290 - 3151714..3151848 (-) 135 WP_168748207.1 hypothetical protein -

Sequence

Protein


Download         Length: 576 a.a.        Molecular weight: 64629.34 Da        Isoelectric Point: 4.6781

>NTDB_id=844475 QLQ02_RS16305 WP_286058330.1 3145495..3147225(+) (recN) [Bacillus mojavensis strain KRS009]
MLAELSIKNFAIIEELTVSFERGLTVLTGETGAGKSIIIDAISLLVGGRGSSEFVRYGETKAELEGLFQLDSGHPVFDVC
AEQGIDVSDEMIVMRRDISTNGKSVCRVNGKLVTIASLREIGRLLLDIHGQHDNQLLMEDENHLQLLDKFAGAEVESALQ
AYQEGYQRYMKLLKKLKQLSESEQEMAHRLDLIQFQLEEIESAKLELNEDEQLQEERQQISNFEKIFESLQNAYNALRSE
QGGLDWVGMASSQLEDLSDINEPLQKLSESVSNSYYLLEDATFQMRNMLDELEYDPERLNFIEARLNEIKQLKRKYGATV
EDILEYASKIEEEIDQIENRDSHLQSLKQELDSVGKDVAVEAANVSRIRKTWAKKLADEIHRELKSLYMEKSTFDTEFKV
RTATRGEEAPVVNGQPVQLTEQGIDLVKFLISTNTGEPLKSLSKVASGGELSRVMLAIKSIFSSQQDVTSIIFDEVDTGV
SGRVAQAIAEKIHKVSMGSQVLCITHLPQVAAMADTHLYIAKELKDGRTTTRIKPLTKQEKVAEIGRMIAGVEVTDLTKR
HAKELLKQADQVKTTG

Nucleotide


Download         Length: 1731 bp        

>NTDB_id=844475 QLQ02_RS16305 WP_286058330.1 3145495..3147225(+) (recN) [Bacillus mojavensis strain KRS009]
TTGTTAGCTGAATTATCGATTAAAAACTTTGCCATTATTGAGGAACTGACGGTTTCTTTTGAACGCGGGCTTACGGTTTT
AACAGGAGAAACCGGAGCCGGCAAATCCATCATCATAGATGCCATTTCACTTTTAGTCGGTGGCCGCGGCTCATCTGAAT
TTGTCAGGTATGGAGAAACAAAAGCCGAACTTGAAGGGCTGTTTCAGTTAGACAGCGGCCATCCCGTTTTTGACGTTTGT
GCTGAACAGGGGATTGACGTTTCAGATGAAATGATCGTCATGAGAAGGGATATCAGCACGAACGGAAAAAGCGTATGCCG
GGTAAATGGCAAACTTGTAACGATTGCGTCGCTAAGAGAAATCGGCAGGCTTTTATTGGATATTCACGGGCAGCACGATA
ACCAGCTGTTAATGGAGGACGAAAATCATCTTCAGCTATTGGACAAGTTTGCGGGAGCCGAAGTGGAAAGCGCACTTCAA
GCGTATCAGGAAGGTTATCAGCGCTACATGAAGCTGCTTAAAAAGTTGAAGCAGCTTTCTGAAAGTGAGCAGGAAATGGC
ACACCGGCTTGATCTGATTCAATTTCAGCTGGAAGAAATTGAATCAGCAAAACTCGAACTGAACGAAGATGAGCAGTTGC
AAGAAGAGCGTCAGCAAATTTCAAATTTTGAGAAAATATTTGAATCACTGCAAAATGCTTATAATGCGCTGCGCAGCGAG
CAGGGCGGTCTGGACTGGGTCGGAATGGCGTCGTCTCAGCTTGAAGATTTATCCGATATTAACGAACCGCTGCAAAAACT
GTCTGAGAGTGTTTCGAACTCCTACTATCTTTTGGAGGACGCTACATTTCAGATGAGAAATATGCTGGATGAGCTTGAAT
ATGACCCGGAACGATTGAATTTTATTGAGGCGCGTCTTAATGAGATTAAGCAGCTAAAGCGGAAATACGGGGCAACCGTT
GAGGATATTTTAGAATATGCTTCTAAAATTGAAGAAGAGATTGATCAAATTGAAAACAGAGACAGCCATCTTCAGAGCCT
GAAGCAGGAGCTGGATTCGGTTGGTAAAGATGTTGCAGTAGAAGCGGCAAACGTTTCCCGAATCCGAAAAACATGGGCGA
AAAAGCTGGCTGACGAAATCCATCGTGAACTGAAAAGCTTATATATGGAAAAGTCGACTTTCGATACGGAGTTTAAGGTC
AGAACAGCAACCCGCGGTGAGGAAGCGCCGGTTGTAAACGGGCAGCCTGTTCAGCTCACTGAACAAGGGATTGATCTGGT
GAAGTTTTTGATTTCTACCAATACGGGGGAGCCGCTGAAATCTCTTTCTAAAGTTGCTTCCGGCGGAGAGCTGTCAAGGG
TCATGCTTGCCATTAAAAGCATTTTCTCCTCACAGCAGGACGTTACCTCGATTATATTTGACGAGGTAGATACAGGCGTA
AGCGGCAGGGTCGCTCAGGCTATTGCTGAAAAGATTCACAAAGTATCAATGGGATCACAAGTGCTTTGCATTACGCACCT
GCCTCAGGTGGCAGCCATGGCCGATACCCATCTTTACATTGCGAAAGAATTAAAAGACGGAAGAACGACGACGCGTATAA
AGCCGCTGACTAAACAAGAGAAGGTGGCGGAAATCGGGCGCATGATAGCAGGAGTCGAAGTCACAGACTTAACAAAACGC
CATGCGAAAGAGCTGTTAAAACAAGCGGATCAAGTCAAAACAACTGGATAA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

95.66

100

0.957