Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   QLQ02_RS05090 Genome accession   NZ_CP127833
Coordinates   1019806..1020204 (+) Length   132 a.a.
NCBI ID   WP_268449031.1    Uniprot ID   -
Organism   Bacillus mojavensis strain KRS009     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1014806..1025204
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ02_RS05065 hxlR 1015529..1015891 (-) 363 WP_003241118.1 transcriptional activator HxlR -
  QLQ02_RS05070 hxlA 1016121..1016753 (+) 633 WP_286059065.1 3-hexulose-6-phosphate synthase -
  QLQ02_RS05075 hxlB 1016759..1017316 (+) 558 WP_010332987.1 6-phospho-3-hexuloisomerase -
  QLQ02_RS05080 tlpC 1017431..1019155 (+) 1725 WP_268449053.1 methyl-accepting chemotaxis protein TlpC -
  QLQ02_RS05085 nucA/comI 1019342..1019779 (+) 438 WP_010332985.1 DNA-entry nuclease Machinery gene
  QLQ02_RS05090 nin/comJ 1019806..1020204 (+) 399 WP_268449031.1 competence protein ComJ Regulator
  QLQ02_RS05095 - 1020240..1021673 (-) 1434 WP_268506299.1 family 1 glycosylhydrolase -
  QLQ02_RS05100 - 1021746..1022474 (-) 729 WP_268506298.1 AAA family ATPase -
  QLQ02_RS05105 - 1022621..1022956 (-) 336 WP_268506297.1 YckD family protein -
  QLQ02_RS05110 - 1023189..1023950 (-) 762 WP_284560174.1 hypothetical protein -
  QLQ02_RS05115 - 1024003..1024845 (-) 843 WP_268506295.1 RES family NAD+ phosphorylase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14914.84 Da        Isoelectric Point: 4.4787

>NTDB_id=844428 QLQ02_RS05090 WP_268449031.1 1019806..1020204(+) (nin/comJ) [Bacillus mojavensis strain KRS009]
MIKSWKPQELTISYHQFTVFQKGSAPPVIDWTDEAIEKGYAEADEAISFEAQRNSKVYILLLLNSSETVASYEKKVTVPF
HVTKDGIEIESIMSKRLSFDLPNGNYQFTCYTVPAELSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=844428 QLQ02_RS05090 WP_268449031.1 1019806..1020204(+) (nin/comJ) [Bacillus mojavensis strain KRS009]
TTGATCAAATCATGGAAGCCGCAAGAACTGACGATTTCATATCATCAATTTACTGTATTTCAAAAGGGTTCTGCACCGCC
TGTCATCGATTGGACAGATGAAGCGATTGAAAAAGGATATGCGGAAGCGGACGAAGCCATTTCGTTTGAGGCACAGCGAA
ATTCAAAGGTATATATTCTTTTACTCCTTAACAGTTCAGAAACTGTAGCATCCTATGAAAAAAAAGTGACTGTTCCTTTT
CACGTCACAAAAGACGGAATTGAAATTGAAAGCATCATGTCCAAAAGACTCTCCTTTGACCTGCCTAATGGGAACTATCA
ATTCACATGCTACACTGTACCGGCTGAGCTGTCAGATCTGCATGCTGACACTTACATCATTGATGCTGTTTCCGTCTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

84.848

100

0.848