Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QLQ02_RS04865 Genome accession   NZ_CP127833
Coordinates   956750..957700 (-) Length   316 a.a.
NCBI ID   WP_010333025.1    Uniprot ID   -
Organism   Bacillus mojavensis strain KRS009     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 951750..962700
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ02_RS04845 - 952615..954033 (+) 1419 WP_010333029.1 MDR family MFS transporter -
  QLQ02_RS04850 - 954083..955036 (-) 954 WP_286059048.1 siderophore ABC transporter substrate-binding protein -
  QLQ02_RS04855 yclP 955058..955816 (-) 759 WP_268444292.1 petrobactin ABC transporter ATP-binding protein YclP -
  QLQ02_RS04860 yclO 955810..956757 (-) 948 WP_010333026.1 petrobactin ABC transporter permease YclO -
  QLQ02_RS04865 ceuB 956750..957700 (-) 951 WP_010333025.1 petrobactin ABC transporter permease YclN Machinery gene
  QLQ02_RS04870 - 958086..959450 (+) 1365 WP_286059049.1 aspartate kinase -
  QLQ02_RS04875 - 959570..959653 (+) 84 Protein_941 sporulation protein YjcZ -
  QLQ02_RS04880 - 959823..959915 (+) 93 WP_026014660.1 YjcZ family sporulation protein -
  QLQ02_RS04885 phrC 960020..960142 (-) 123 WP_024120213.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  QLQ02_RS04890 rapC 960126..961274 (-) 1149 WP_024120212.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35011.45 Da        Isoelectric Point: 9.8262

>NTDB_id=844423 QLQ02_RS04865 WP_010333025.1 956750..957700(-) (ceuB) [Bacillus mojavensis strain KRS009]
MKLRYLFFLLIILAVTSVFIGVEDLSPLDLFDLSKEEASTLFASRLPRLISILIAGMSMSICGLIMQQITRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLIAFVFALVGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=844423 QLQ02_RS04865 WP_010333025.1 956750..957700(-) (ceuB) [Bacillus mojavensis strain KRS009]
ATGAAGCTACGTTACTTATTTTTTCTACTTATCATATTAGCAGTCACTTCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATCTAAGCAAAGAAGAGGCATCAACGCTCTTTGCCAGCCGTTTGCCGCGGCTGATCAGCATTTTAA
TCGCAGGGATGAGCATGAGCATCTGCGGCCTGATTATGCAGCAGATCACCAGAAACAAATTCGTGTCACCGACGACGGCC
GGCACGATGGACTGGGCGAGGCTGGGAATCTTAATATCCTTGCTTCTGTTTACATCGGCAAGTCCATTAATGAAAATGCT
GATTGCTTTTGTCTTTGCTCTAGTTGGTAATTTTCTGTTTATGAAAATTCTTGAAAGAATTAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGCTCAATCGCGACGTTTATCGCGTATAAATATGACTTGATC
CAAAACGTGTCATCATGGCTTCAGGGGGATTTCTCCTTAGTTGTGAAAGGGAGATACGAGCTTCTCTATCTGAGTATTCC
GCTTGTCATCATTGCCTATGTTTATGCGGATAAATTTACAGTGGCGGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTATCCCTGATTACGTCACTTGTCATTTTGACTGTCGGTATG
CTTCCGTTTCTCGGTTTAATCATCCCGAACATTGTATCGATTTACAGAGGAGACAACCTAAAAAACAGCCTGCCGCACAC
TGCGCTGCTGGGAGCGGTTTTTGTTCTGTTTTGCGATATATTGGGCAGAGTCATTATCTTCCCTTATGAAATCTCGATTG
GTCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

100

0.538