Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QRY57_RS20650 Genome accession   NZ_CP127376
Coordinates   3696467..3697261 (-) Length   264 a.a.
NCBI ID   WP_026589997.1    Uniprot ID   -
Organism   Bacillus arachidis strain YX15     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3691467..3702261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRY57_RS20625 (QRY57_20630) yqiS 3691641..3692540 (-) 900 WP_026590001.1 phosphate butyryltransferase -
  QRY57_RS20630 (QRY57_20635) - 3692736..3694808 (-) 2073 WP_090687446.1 sigma-54-dependent Fis family transcriptional regulator -
  QRY57_RS20635 (QRY57_20640) - 3694947..3695180 (+) 234 WP_026589999.1 DUF2627 domain-containing protein -
  QRY57_RS20640 (QRY57_20645) - 3695219..3695947 (-) 729 WP_286015993.1 glycerophosphodiester phosphodiesterase -
  QRY57_RS20645 (QRY57_20650) - 3695998..3696144 (+) 147 WP_286015994.1 YycC family protein -
  QRY57_RS20650 (QRY57_20655) spo0A 3696467..3697261 (-) 795 WP_026589997.1 sporulation transcription factor Spo0A Regulator
  QRY57_RS20655 (QRY57_20660) spoIVB 3697555..3698856 (-) 1302 WP_026589996.1 SpoIVB peptidase -
  QRY57_RS20660 (QRY57_20665) recN 3698974..3700713 (-) 1740 WP_286015995.1 DNA repair protein RecN Machinery gene
  QRY57_RS20665 (QRY57_20670) argR 3700977..3701426 (-) 450 WP_017150893.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29553.33 Da        Isoelectric Point: 7.4719

>NTDB_id=843791 QRY57_RS20650 WP_026589997.1 3696467..3697261(-) (spo0A) [Bacillus arachidis strain YX15]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGIAYNGQECLNLLKEKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKTNTTIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=843791 QRY57_RS20650 WP_026589997.1 3696467..3697261(-) (spo0A) [Bacillus arachidis strain YX15]
GTGGAGAAAATTAAAGTGTGTCTTGTGGATGATAATAAGGAACTAGTATCAATGTTAGAAAGTTATGTTGCTGCCCAAGA
TGATATGGAAGTAATTGGGATCGCTTATAATGGTCAAGAGTGTTTAAATTTACTGAAAGAGAAACAACCAGATGTACTCG
TTTTGGATATTATTATGCCGCATTTAGATGGTTTAGCGGTATTAGAGAAAATGCGGCATATTGAACGACTAAGGCAGCCG
AATGTTATTATGTTAACAGCATTTGGACAAGAGGATGTAACGAAAAAAGCAGTTGATTTAGGTGCTTCTTATTTTATCTT
AAAGCCATTTGATATGGAAAATTTAACGAGCCATATTCGTCAAGTAAGCGGTAAAACGAATACTACAATTAAACGTCCAC
TACCATCTTTCCGATCTGCAACAACAGTAGATGGAAAACCGAAGAATCTAGATGCGAGTATTACCAGCATTATTCATGAA
ATTGGTGTACCAGCTCATATTAAAGGATACATGTATTTGCGAGAGGCGATCTCTATGGTATATAACGATATCGAGCTTCT
TGGCTCTATTACGAAAGTTTTATACCCGGATATTGCAAAAAAATATAATACGACAGCAAGTCGTGTAGAACGCGCAATCC
GCCATGCAATTGAAGTGGCGTGGAGTCGTGGGAATATTGATTCAATCTCGTCCTTATTTGGTTATACTGTATCGATGTCA
AAAGCAAAACCTACGAATTCAGAATTTATCGCGATGGTAGCAGATAAGTTAAGGCTTGAACATAAGGCTAGCTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

81.273

100

0.822