Detailed information    

insolico Bioinformatically predicted

Overview


Name   addA   Type   Machinery gene
Locus tag   QRY57_RS07340 Genome accession   NZ_CP127376
Coordinates   1157140..1160865 (+) Length   1241 a.a.
NCBI ID   WP_286017085.1    Uniprot ID   -
Organism   Bacillus arachidis strain YX15     
Function   homologous recombination; plasmid transformation (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1152140..1165865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRY57_RS07325 (QRY57_07330) - 1152294..1152887 (+) 594 WP_026590502.1 TVP38/TMEM64 family protein -
  QRY57_RS07330 (QRY57_07335) lepB 1152945..1153508 (+) 564 WP_026590501.1 signal peptidase I -
  QRY57_RS07335 (QRY57_07340) addB 1153631..1157143 (+) 3513 WP_286017084.1 helicase-exonuclease AddAB subunit AddB Machinery gene
  QRY57_RS07340 (QRY57_07345) addA 1157140..1160865 (+) 3726 WP_286017085.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  QRY57_RS07345 (QRY57_07350) - 1160942..1161235 (+) 294 WP_026590498.1 RNA polymerase alpha subunit C-terminal domain-containing protein -
  QRY57_RS07350 (QRY57_07355) gerPF 1161320..1161535 (-) 216 WP_001141566.1 spore germination protein GerPF -
  QRY57_RS07355 (QRY57_07360) - 1161581..1161967 (-) 387 WP_208017793.1 spore germination protein GerPE -
  QRY57_RS07360 (QRY57_07365) - 1161980..1162174 (-) 195 WP_090693406.1 spore gernimation protein GerPD -
  QRY57_RS07365 (QRY57_07370) - 1162181..1162795 (-) 615 WP_098303074.1 spore germination protein GerPC -
  QRY57_RS07370 (QRY57_07375) - 1162879..1163070 (-) 192 WP_026590494.1 spore germination protein GerPB -
  QRY57_RS07375 (QRY57_07380) - 1163087..1163308 (-) 222 WP_026590493.1 spore germination protein -
  QRY57_RS07380 (QRY57_07385) - 1163479..1163658 (-) 180 WP_026590492.1 aspartyl-phosphate phosphatase Spo0E family protein -
  QRY57_RS07385 (QRY57_07390) - 1163900..1164799 (+) 900 WP_286017086.1 fumarylacetoacetate hydrolase family protein -
  QRY57_RS07390 (QRY57_07395) - 1164771..1165274 (+) 504 WP_231503893.1 HXXEE domain-containing protein -

Sequence


Protein


Download         Length: 1241 a.a.        Molecular weight: 143137.61 Da        Isoelectric Point: 5.1447

>NTDB_id=843773 QRY57_RS07340 WP_286017085.1 1157140..1160865(+) (addA) [Bacillus arachidis strain YX15]
MIENWPQKPEGSQWTDDQWKAVVRDGRDILVAAAAGSGKTAVLVERMIRKIINAENPVDVDRLLVVTFTNAAAQEMKNRI
GEALEKVLIDDPGSGHIRKQLSLLNKASISTIHSFCLQVIRTYYYMLDVDPRFRIANQTENELLKEEVLDDILEEEYGTE
GNNIFFELVDRYTSDRSDDDLQRMILALHTESRAHPDPEKWLDKLVEAYDVEGKSIEDLTYASYLLEDVKFQLETAEKHV
QKAIELTMLPDGPAPRMETLQADLVLLGTLSSAAHQSWTSVYEAMQNVSWQTLKRIKKSDYNEEIVKQVDSLRNKAKDEV
KKLHEELFSRKPESFLRDFKEMHPVLEKLVQIVKVFTERFQAIKRDKGMVDFTDLEHFCLQILSERTENGELRPSPVALQ
YRNKFTEVLVDEYQDTNFVQESIIKFVTKDSEQEGNLFMVGDVKQSIYRFRLAEPGLFLGKYKRFTAEGIDGGMKIDLAK
NFRSRHEVLAGTNFIFKQIMGETVGEIEYDADAELKLGASYPEGEDVAAELLCIHQSEGEESAEGEDGVEVEKAQLEARL
MAGRIKAMVDSGYEVYDRKTDSMRPVKYRDFVILLRSMPWAPQIMEELKLQGIPVYAELATGYFEATEVTVMMNVFRVID
NPMQDIPLAAVLRSPIVGLHDEELAMLRAHEKKGSFYEVMRSFLQGAPLEEEAELHGKLQWFYNLLQGWREFARQQSLSD
LIWKVYRETGYYDFVGGLPAGKQRQANLRVLYDRARQYEATSFRGLFRFLRFIERILERGDDMGTARALGEQEDVVRIMT
IHKSKGLEFPVVFVAGLGRRFNTQDLMKRFLLHKDFGFGSQFIDPRKRIKYTTLSQLAIKRKMKMELIAEEMRVLYVALT
RAKEKLILIGTVKDKAKEMEKWLDAREHTDWLLPDYLRAGASCYLDWIAPSLYRHRDSEMLLELGQGNIPNEIYEYDASW
KVEIVDGSTLLAPEPVQEEKQELLEALREKKTVPLESERKEEVYARLTWEYAHEGATMHRAKQSVTEIKRNYQSEDGSDH
AFIKKLRAPIKTRPRFMEKKGLTYAERGTAVHAVMQHVNLQKTITPETIKEQIAEMVNKELLTFEQAEEIAIDRIVAFFD
TDLGKRVLAAKSVEREVPFTMMLSAKEAYQEWEGQSKESILVQGVIDCMIEEEDGIVLIDFKTDTIEGRFPGGYDQARPI
LEDRYKVQINLYAKALEKSLHHPVKGKYLYFFDGNHIVHVD

Nucleotide


Download         Length: 3726 bp        

>NTDB_id=843773 QRY57_RS07340 WP_286017085.1 1157140..1160865(+) (addA) [Bacillus arachidis strain YX15]
ATGATAGAGAATTGGCCACAGAAACCTGAAGGTAGTCAATGGACAGATGATCAATGGAAGGCAGTTGTCAGAGATGGCCG
TGATATTTTAGTCGCGGCGGCAGCTGGGTCAGGAAAGACAGCTGTACTTGTAGAAAGAATGATTCGCAAAATTATTAATG
CTGAGAATCCAGTTGATGTAGATCGTCTGCTTGTCGTAACATTTACAAATGCAGCAGCGCAAGAGATGAAGAACAGAATT
GGCGAAGCGTTAGAAAAAGTATTAATTGATGATCCAGGGTCAGGGCATATTCGTAAGCAGCTCAGCTTATTGAATAAAGC
ATCGATTTCAACGATTCACTCGTTCTGTTTACAAGTTATTCGAACGTACTACTATATGCTCGACGTTGATCCGCGTTTTC
GCATTGCAAACCAGACAGAAAATGAATTATTAAAAGAAGAAGTATTAGATGACATATTAGAAGAGGAATATGGCACAGAG
GGAAATAATATTTTCTTTGAGCTTGTTGATCGCTATACGAGTGACCGAAGTGATGATGACTTGCAGCGCATGATTTTAGC
GCTTCATACAGAATCAAGAGCACATCCAGATCCAGAGAAATGGCTTGATAAGCTAGTGGAAGCATATGATGTGGAAGGAA
AATCAATTGAGGATTTAACGTATGCTTCTTACTTATTAGAAGATGTGAAGTTTCAGCTAGAAACTGCCGAAAAGCATGTT
CAAAAAGCAATTGAACTTACTATGCTTCCAGATGGGCCAGCACCCCGCATGGAGACATTACAAGCAGATTTGGTGTTACT
CGGAACGTTATCTAGTGCAGCGCATCAGTCTTGGACAAGTGTCTATGAAGCGATGCAAAATGTTTCGTGGCAAACGCTAA
AGCGTATTAAGAAGAGTGACTACAATGAAGAGATTGTAAAACAAGTAGATTCACTTCGAAATAAAGCAAAAGATGAAGTG
AAGAAGTTACATGAAGAGTTGTTTAGCCGAAAACCAGAAAGTTTTTTACGTGATTTTAAGGAAATGCATCCTGTACTAGA
AAAGCTTGTTCAGATTGTAAAAGTATTTACGGAGCGATTCCAAGCGATCAAGCGTGATAAAGGAATGGTTGATTTCACAG
ATTTAGAGCATTTTTGCTTACAAATTTTAAGTGAACGTACAGAAAATGGTGAGCTTCGTCCGTCACCGGTTGCGCTTCAA
TATCGCAATAAATTTACTGAAGTACTTGTCGACGAATATCAAGATACAAACTTTGTCCAGGAGTCGATTATTAAGTTTGT
AACGAAAGACTCTGAGCAAGAAGGTAATCTGTTTATGGTTGGCGACGTAAAACAATCGATTTATCGATTCCGACTAGCAG
AACCGGGCCTTTTCCTAGGGAAATATAAACGTTTTACGGCTGAAGGAATAGACGGCGGTATGAAGATTGATTTAGCGAAA
AACTTCCGTAGTCGTCACGAAGTGTTAGCCGGTACGAACTTTATTTTTAAACAAATTATGGGCGAAACGGTCGGGGAAAT
TGAGTATGACGCCGATGCTGAACTAAAGTTAGGTGCAAGTTATCCAGAAGGGGAAGATGTAGCGGCTGAGCTATTATGTA
TTCATCAGTCTGAGGGTGAAGAATCGGCAGAGGGAGAAGACGGTGTTGAAGTAGAAAAAGCACAGCTGGAAGCGCGTTTA
ATGGCCGGGAGAATTAAAGCGATGGTGGATTCCGGTTATGAAGTATACGATCGTAAAACAGATAGCATGCGCCCGGTGAA
ATATCGTGACTTTGTTATTTTACTTCGCTCGATGCCGTGGGCTCCTCAAATTATGGAAGAATTAAAGTTGCAAGGTATTC
CTGTTTACGCTGAGCTTGCAACGGGTTATTTTGAAGCAACAGAAGTGACCGTTATGATGAATGTATTTCGCGTAATCGAT
AATCCGATGCAAGACATTCCGCTTGCCGCTGTACTACGTTCCCCAATTGTTGGATTACATGATGAGGAGCTTGCGATGCT
TCGTGCTCATGAAAAGAAAGGTTCGTTTTATGAAGTGATGCGTTCCTTCTTACAAGGAGCGCCGCTTGAGGAAGAGGCGG
AATTACACGGAAAACTACAATGGTTCTATAACCTTCTGCAAGGATGGCGTGAATTTGCACGCCAGCAATCACTTTCTGAT
TTGATTTGGAAAGTATATCGTGAGACAGGTTATTATGACTTTGTTGGTGGTCTTCCAGCAGGAAAACAGCGCCAGGCTAA
CTTACGCGTATTATACGACCGGGCAAGGCAGTATGAAGCAACATCTTTCCGCGGGTTATTCCGTTTCCTTCGCTTTATTG
AGCGGATTTTAGAGCGCGGAGATGATATGGGAACAGCGAGAGCGCTTGGCGAGCAAGAAGATGTTGTGCGAATTATGACG
ATTCATAAAAGTAAGGGGTTAGAGTTCCCGGTTGTATTTGTAGCGGGACTTGGACGCCGTTTTAATACACAAGATTTAAT
GAAACGATTCTTATTACACAAGGATTTCGGTTTTGGATCACAGTTTATTGATCCTCGTAAGCGAATTAAATATACGACGC
TATCGCAATTGGCCATTAAACGTAAAATGAAGATGGAACTTATTGCGGAAGAGATGCGCGTATTATATGTTGCTTTAACG
CGTGCGAAAGAGAAGTTAATTTTAATTGGTACAGTGAAAGATAAAGCAAAAGAAATGGAAAAGTGGCTTGATGCAAGAGA
GCATACAGATTGGTTATTACCAGATTATCTTCGTGCGGGTGCATCTTGTTACTTAGATTGGATTGCGCCGTCACTATATA
GACATCGTGATAGTGAAATGCTTCTTGAACTTGGACAAGGAAATATACCAAATGAAATTTATGAATACGATGCGAGCTGG
AAAGTGGAAATCGTTGATGGTAGCACTTTACTTGCACCTGAACCAGTACAAGAAGAGAAGCAAGAATTGTTAGAAGCACT
TCGTGAGAAAAAAACTGTTCCGCTAGAAAGTGAACGAAAAGAAGAAGTGTATGCTCGTTTAACATGGGAATATGCGCATG
AAGGTGCAACAATGCACCGGGCGAAGCAATCTGTTACGGAAATAAAGCGGAATTATCAGTCAGAAGATGGAAGTGATCAT
GCTTTTATTAAAAAACTTCGTGCTCCTATAAAAACGCGACCTCGTTTTATGGAGAAAAAGGGGTTGACCTACGCTGAACG
AGGGACAGCTGTCCACGCCGTCATGCAGCATGTTAATTTACAAAAAACGATTACACCAGAAACAATCAAAGAACAAATTG
CGGAAATGGTAAATAAAGAATTACTAACATTTGAGCAAGCAGAAGAAATTGCGATTGATCGAATTGTAGCATTTTTTGAT
ACGGATCTTGGTAAACGTGTGTTAGCTGCGAAGAGTGTAGAGCGTGAAGTGCCCTTTACGATGATGCTTTCAGCAAAAGA
GGCATATCAAGAGTGGGAAGGTCAGAGCAAAGAATCTATACTTGTCCAAGGGGTTATTGATTGTATGATAGAAGAGGAAG
ATGGGATTGTATTAATTGATTTTAAAACAGATACAATTGAAGGGCGTTTTCCGGGTGGATACGATCAAGCGCGACCTATT
TTAGAAGACCGTTATAAAGTGCAAATTAATCTATATGCGAAAGCGCTAGAGAAAAGCTTACATCATCCTGTGAAGGGGAA
ATATTTATACTTCTTTGATGGGAATCACATAGTACATGTTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  addA Bacillus subtilis subsp. subtilis str. 168

54.05

100

0.543