Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | QRY57_RS02165 | Genome accession | NZ_CP127376 |
| Coordinates | 96418..98853 (+) | Length | 811 a.a. |
| NCBI ID | WP_286016584.1 | Uniprot ID | - |
| Organism | Bacillus arachidis strain YX15 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 91418..103853
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QRY57_RS02150 (QRY57_02155) | - | 94169..94630 (+) | 462 | WP_286016582.1 | CtsR family transcriptional regulator | - |
| QRY57_RS02155 (QRY57_02160) | - | 94778..95326 (+) | 549 | WP_026593142.1 | UvrB/UvrC motif-containing protein | - |
| QRY57_RS02160 (QRY57_02165) | - | 95331..96395 (+) | 1065 | WP_286016583.1 | protein arginine kinase | - |
| QRY57_RS02165 (QRY57_02170) | clpC | 96418..98853 (+) | 2436 | WP_286016584.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| QRY57_RS02170 (QRY57_02175) | radA | 98949..100325 (+) | 1377 | WP_026593145.1 | DNA repair protein RadA | Machinery gene |
| QRY57_RS02175 (QRY57_02180) | disA | 100329..101405 (+) | 1077 | WP_026593146.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| QRY57_RS02180 (QRY57_02185) | - | 101566..102684 (+) | 1119 | WP_090694445.1 | PIN/TRAM domain-containing protein | - |
| QRY57_RS02185 (QRY57_02190) | ispD | 102701..103384 (+) | 684 | WP_208019191.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90512.42 Da Isoelectric Point: 6.3063
>NTDB_id=843765 QRY57_RS02165 WP_286016584.1 96418..98853(+) (clpC) [Bacillus arachidis strain YX15]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEMSQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEATSGHQGGASANAN
TPTLDSLARDLTVVAREGRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDASVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETNKLLNLESILHDRVIGQDEAVIAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVGRLKEQEIELELTSAAIEAIADQGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVVFDAEGE
SFVIRSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEMSQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEATSGHQGGASANAN
TPTLDSLARDLTVVAREGRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDASVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETNKLLNLESILHDRVIGQDEAVIAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVGRLKEQEIELELTSAAIEAIADQGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVVFDAEGE
SFVIRSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=843765 QRY57_RS02165 WP_286016584.1 96418..98853(+) (clpC) [Bacillus arachidis strain YX15]
ATGATGTTTGGAAGATTTACAGAACGAGCACAGAAAGTATTAGCTTTATCTCAAGAAGAGGCAATTCGCATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCTAAAGCGTTAATCGCCCTTG
GATTAAGCCCGGAGAAGGTACAAAAAGAGGTAGAGGCATTGATTGGCCGTGGAACAGAGATGTCTCAAACGGTTCATTAT
ACACCGCGTGCAAAAAAAGTAATTGAATTATCAATGGATGAGGCACGTAAACTTGGTCATTCTTATGTCGGAACAGAACA
TATTTTATTAGGATTGATTCGTGAAGGTGAAGGCGTTGCGGCGCGAGTATTAAATAACTTAGGTGTAAGTTTAAATAAAG
CAAGACAGCAAGTATTACAGCTCCTTGGAAGCAATGAAGCTACATCAGGTCATCAAGGTGGTGCATCAGCAAATGCAAAT
ACACCAACGCTTGATAGTCTAGCACGTGATTTAACGGTTGTGGCACGTGAAGGGCGCCTAGATCCTGTTATTGGCCGTAG
TAAAGAGATTCAACGTGTTATTGAAGTACTGAGCCGCAGAACTAAGAATAACCCAGTATTGATCGGAGAACCTGGGGTAG
GTAAAACGGCAATAGCTGAGGGCCTAGCACAGCAAATTGTAAATAATGAAGTTCCAGAAACATTACGTGATAAGCGTGTT
ATGACGTTAGATATGGGTACAGTTGTTGCTGGTACGAAGTATCGTGGTGAATTTGAAGACCGCTTAAAGAAAGTGATGGA
TGAAATTCGACAAGCGGGTAATATTATCTTGTTTATTGACGAACTTCATACATTAATTGGTGCAGGTGGTGCAGAAGGTG
CGATTGACGCATCCAATATTTTAAAACCATCATTAGCACGTGGTGAATTGCAATGCATTGGAGCGACAACGTTAGATGAG
TATCGTAAATACATTGAAAAAGATGCAGCGCTGGAAAGACGTTTCCAACCAATTCATGTTGATGAACCGAGCTTAGAAGA
ATCGATTCAAATTTTAAAAGGATTACGTGACCGTTACGAAGCGCATCATCGTGTTTCCATTACGGATGATGCAATTGATG
CATCTGTAAAACTTTCAGATCGTTATATTACAGATCGCTTTTTGCCTGATAAAGCAATTGACTTAATCGATGAAGCAGCT
TCAAAAGTACGCTTACGTTCTTATACAACACCACCAAATTTAAAAGAACTTGAAGTGAAGCTTGAAGAAATTCGAAAAGA
AAAAGATGCAGCTGTACAGAGCCAAGAGTTTGAAAAGGCAGCTTCTTTACGCGATATGGAACAACGTTTACGTGAAAAGT
TAGAAGATACAAAACGTCAGTGGAAAGAGCAGCAAGGAAAAGAAAACTCTGAAGTAACAGTAGAGGATATTGCAAATGTT
GTTTCTACGTGGACGCGTATTCCAGTTTCTAAACTTGCACAAACAGAAACAAACAAATTATTGAATCTAGAATCCATTTT
ACATGACCGTGTAATTGGTCAAGATGAAGCTGTTATTGCGGTAGCGAAAGCAGTGCGCCGTGCACGAGCAGGTTTAAAAG
ATCCAAAACGTCCAATTGGTTCATTTATTTTCTTGGGACCCACTGGGGTAGGTAAAACCGAATTAGCAAGAGCGCTGGCG
GAATCCATGTTTGGTGATGAAGATGCGATGATTCGGATTGATATGTCTGAGTACATGGAGAAACATTCTACTTCTCGCTT
AGTTGGATCTCCTCCAGGGTATGTTGGGTACGAAGAGGGCGGTCAATTGACGGAAAAAGTTCGTCGTAAACCATATTCTG
TCGTTCTATTAGATGAAGTAGAGAAGGCACATCCAGATGTATTTAACATCTTACTGCAGGTGTTAGAAGATGGCCGTTTA
ACAGATTCTAAAGGACGCACAGTGGATTTCCGTAATACAATTGTTATTATGACTTCTAACGTTGGTGCTGAGGCATTAAA
ACGTAATAAACATCTTGGTTTTAACGTACAAGATGAGAGCCGTGATTATTCGGATATGAAGGGTAAAGTAATGGATGAAT
TGAAAAAAGCATTTCGTCCAGAATTCTTAAACCGTATCGATGAAATCATTGTGTTCCATATGCTTGAGAAAAAACACATT
CAGGAAATTGTAACGCTCATGGTGAATCAATTGGTGGGCCGTTTAAAAGAACAAGAAATTGAATTAGAGTTAACAAGCGC
AGCGATTGAAGCGATTGCTGATCAAGGATTTGATCGTGAGTATGGTGCTCGGCCACTACGCCGAGCAATTCAAAAACATG
TGGAAGATCGATTATCAGAAGAGCTTCTAAAAGGAGCAATTGAGAAAGGTCAAAAAGTTGTCTTCGATGCTGAAGGAGAA
TCATTTGTCATTCGTAGTGCAGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAACGAGCACAGAAAGTATTAGCTTTATCTCAAGAAGAGGCAATTCGCATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCTAAAGCGTTAATCGCCCTTG
GATTAAGCCCGGAGAAGGTACAAAAAGAGGTAGAGGCATTGATTGGCCGTGGAACAGAGATGTCTCAAACGGTTCATTAT
ACACCGCGTGCAAAAAAAGTAATTGAATTATCAATGGATGAGGCACGTAAACTTGGTCATTCTTATGTCGGAACAGAACA
TATTTTATTAGGATTGATTCGTGAAGGTGAAGGCGTTGCGGCGCGAGTATTAAATAACTTAGGTGTAAGTTTAAATAAAG
CAAGACAGCAAGTATTACAGCTCCTTGGAAGCAATGAAGCTACATCAGGTCATCAAGGTGGTGCATCAGCAAATGCAAAT
ACACCAACGCTTGATAGTCTAGCACGTGATTTAACGGTTGTGGCACGTGAAGGGCGCCTAGATCCTGTTATTGGCCGTAG
TAAAGAGATTCAACGTGTTATTGAAGTACTGAGCCGCAGAACTAAGAATAACCCAGTATTGATCGGAGAACCTGGGGTAG
GTAAAACGGCAATAGCTGAGGGCCTAGCACAGCAAATTGTAAATAATGAAGTTCCAGAAACATTACGTGATAAGCGTGTT
ATGACGTTAGATATGGGTACAGTTGTTGCTGGTACGAAGTATCGTGGTGAATTTGAAGACCGCTTAAAGAAAGTGATGGA
TGAAATTCGACAAGCGGGTAATATTATCTTGTTTATTGACGAACTTCATACATTAATTGGTGCAGGTGGTGCAGAAGGTG
CGATTGACGCATCCAATATTTTAAAACCATCATTAGCACGTGGTGAATTGCAATGCATTGGAGCGACAACGTTAGATGAG
TATCGTAAATACATTGAAAAAGATGCAGCGCTGGAAAGACGTTTCCAACCAATTCATGTTGATGAACCGAGCTTAGAAGA
ATCGATTCAAATTTTAAAAGGATTACGTGACCGTTACGAAGCGCATCATCGTGTTTCCATTACGGATGATGCAATTGATG
CATCTGTAAAACTTTCAGATCGTTATATTACAGATCGCTTTTTGCCTGATAAAGCAATTGACTTAATCGATGAAGCAGCT
TCAAAAGTACGCTTACGTTCTTATACAACACCACCAAATTTAAAAGAACTTGAAGTGAAGCTTGAAGAAATTCGAAAAGA
AAAAGATGCAGCTGTACAGAGCCAAGAGTTTGAAAAGGCAGCTTCTTTACGCGATATGGAACAACGTTTACGTGAAAAGT
TAGAAGATACAAAACGTCAGTGGAAAGAGCAGCAAGGAAAAGAAAACTCTGAAGTAACAGTAGAGGATATTGCAAATGTT
GTTTCTACGTGGACGCGTATTCCAGTTTCTAAACTTGCACAAACAGAAACAAACAAATTATTGAATCTAGAATCCATTTT
ACATGACCGTGTAATTGGTCAAGATGAAGCTGTTATTGCGGTAGCGAAAGCAGTGCGCCGTGCACGAGCAGGTTTAAAAG
ATCCAAAACGTCCAATTGGTTCATTTATTTTCTTGGGACCCACTGGGGTAGGTAAAACCGAATTAGCAAGAGCGCTGGCG
GAATCCATGTTTGGTGATGAAGATGCGATGATTCGGATTGATATGTCTGAGTACATGGAGAAACATTCTACTTCTCGCTT
AGTTGGATCTCCTCCAGGGTATGTTGGGTACGAAGAGGGCGGTCAATTGACGGAAAAAGTTCGTCGTAAACCATATTCTG
TCGTTCTATTAGATGAAGTAGAGAAGGCACATCCAGATGTATTTAACATCTTACTGCAGGTGTTAGAAGATGGCCGTTTA
ACAGATTCTAAAGGACGCACAGTGGATTTCCGTAATACAATTGTTATTATGACTTCTAACGTTGGTGCTGAGGCATTAAA
ACGTAATAAACATCTTGGTTTTAACGTACAAGATGAGAGCCGTGATTATTCGGATATGAAGGGTAAAGTAATGGATGAAT
TGAAAAAAGCATTTCGTCCAGAATTCTTAAACCGTATCGATGAAATCATTGTGTTCCATATGCTTGAGAAAAAACACATT
CAGGAAATTGTAACGCTCATGGTGAATCAATTGGTGGGCCGTTTAAAAGAACAAGAAATTGAATTAGAGTTAACAAGCGC
AGCGATTGAAGCGATTGCTGATCAAGGATTTGATCGTGAGTATGGTGCTCGGCCACTACGCCGAGCAATTCAAAAACATG
TGGAAGATCGATTATCAGAAGAGCTTCTAAAAGGAGCAATTGAGAAAGGTCAAAAAGTTGTCTTCGATGCTGAAGGAGAA
TCATTTGTCATTCGTAGTGCAGAAAAGGTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
86.049 |
99.877 |
0.859 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.938 |
100 |
0.499 |
| clpC | Streptococcus thermophilus LMD-9 |
46.45 |
100 |
0.476 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.959 |
100 |
0.47 |
| clpC | Streptococcus mutans UA159 |
45.138 |
100 |
0.464 |
| clpC | Streptococcus pneumoniae D39 |
46.926 |
98.274 |
0.461 |
| clpC | Streptococcus pneumoniae Rx1 |
46.926 |
98.274 |
0.461 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.625 |
98.644 |
0.46 |
| clpE | Streptococcus mutans UA159 |
53.692 |
80.148 |
0.43 |
| clpE | Streptococcus pneumoniae R6 |
53.014 |
79.778 |
0.423 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.014 |
79.778 |
0.423 |
| clpE | Streptococcus pneumoniae Rx1 |
53.014 |
79.778 |
0.423 |
| clpE | Streptococcus pneumoniae D39 |
53.014 |
79.778 |
0.423 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.208 |
78.175 |
0.408 |