Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   QRA07_RS04290 Genome accession   NZ_CP127321
Coordinates   879768..884273 (+) Length   1501 a.a.
NCBI ID   WP_233734677.1    Uniprot ID   -
Organism   Acinetobacter pittii strain PC870     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 874768..889273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA07_RS04265 (QRA07_04265) - 875211..875849 (-) 639 WP_017385895.1 hypothetical protein -
  QRA07_RS04270 (QRA07_04270) pilG 876134..876517 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  QRA07_RS04275 (QRA07_04275) pilH 876540..876902 (+) 363 WP_002116220.1 PleD family two-component system response regulator -
  QRA07_RS04280 (QRA07_04280) pilI 876963..877499 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  QRA07_RS04285 (QRA07_04285) pilJ 877542..879620 (+) 2079 WP_233734675.1 methyl-accepting chemotaxis protein -
  QRA07_RS04290 (QRA07_04290) chpA 879768..884273 (+) 4506 WP_233734677.1 Hpt domain-containing protein Regulator
  QRA07_RS04295 (QRA07_04295) - 884273..884740 (+) 468 WP_233734679.1 hypothetical protein -
  QRA07_RS04300 (QRA07_04300) dapE 884775..885911 (-) 1137 WP_233734681.1 succinyl-diaminopimelate desuccinylase -
  QRA07_RS04305 (QRA07_04305) - 886038..886181 (-) 144 WP_014207555.1 entericidin A/B family lipoprotein -
  QRA07_RS04310 (QRA07_04310) - 886305..887186 (-) 882 WP_069036167.1 DUF1853 family protein -
  QRA07_RS04315 (QRA07_04315) - 887290..887658 (+) 369 WP_233734683.1 YbaN family protein -
  QRA07_RS04320 (QRA07_04320) elsL 887810..888313 (+) 504 WP_032005430.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 171258.63 Da        Isoelectric Point: 4.4392

>NTDB_id=843406 QRA07_RS04290 WP_233734677.1 879768..884273(+) (chpA) [Acinetobacter pittii strain PC870]
MKEILKTLTEAMMLPEDSYSQQDDEFLEIFVEEIEEIFVELQSLIHEWMQSKNIATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLGLTPNIQQYVQLVFKFYFFKLVDDFKSKKDHTLDFRPLILLGQQLQQQQSVEPALDELLLLS
DILTAETQTGLETNDLEPESTEVLTISTPEVAIETEQTLAETLILFMEEAEEHLATIDQFLEKEIHQHESYNALIRALHT
LRGSSAMAHVEPIFDASTKVEHLFKILLQEELSSHSEEISLLRDYRQFIRNSLDLLAAHYSTEQLESDLQKFNQVWDAYM
EQHGEHSSPLMPPHGLVSQLLQLDVAELLDAELDFEKGIRTEFPHYLERLSEQADVLLQHTQSQAMIGLYEYTNQLKESY
DILLDRPDLLQSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLDELKLYTQYIPNLNSESLETHQDVFEPLFNA
EVEQTANDPLIENVFTDQVTIGQSVQLDRQFISSEHVNRHFDPDLLDIFLEEADELLEGMDTDLNLWVDDQENFAALNNL
MRYLHTLKGGANMIQATYIGLIAHELESIYERLIQKQLIASSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKN
AGQVFDSHIKESKTEPETYVIPELNFEVLQQEAINNTALNLSELTSGSEQIAKSNNQLVEQTELQVLYADHNHTESIPDQ
DINTVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEQFALHHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFSTEPVMSFVQGDGTEPPPMMGEWE
QAQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAKHGIEN
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTEGLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTALNRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRVQREQAKKPETGRIELNIHRQGTDVVVTF
KDDGQGIDIEKVRQKALMSGLINAEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQ
GTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSAQEFFEFENKRYPLRYLSEFVGNQPIPRL
SGMMYSLPVLMIKANNGQTIALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTHRHK
SLNEAIYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGADAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDLHQDMPVIMITSRTGEKHRERAFALGVNQYMGKPFQEEDLLHNIDALFMTFEGGLA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=843406 QRA07_RS04290 WP_233734677.1 879768..884273(+) (chpA) [Acinetobacter pittii strain PC870]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTACTCTCAACAAGACGATGAATTTCT
TGAAATATTTGTCGAAGAAATTGAAGAAATTTTTGTTGAATTACAATCTTTGATTCACGAATGGATGCAATCTAAAAATA
TTGCTACGCTTACTGAAATCCGCCGTCATTTTCATACATTGAAAGGTTCTGGGCGAATGATTGGTGCCAAATCTTCTGCT
GAGCTTGCTTGGACTGTAGAAGATACGCTTAATCGGGTAATCAATCAGAGTCTCGGATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAGTTAGTAGATGACTTCAAATCTAAAAAAGATCATACCTTAGACTTTA
GGCCCCTAATTTTATTGGGACAACAATTACAACAACAGCAAAGTGTAGAACCCGCGTTAGACGAACTTTTATTATTATCA
GATATTCTTACTGCTGAAACTCAAACCGGTTTAGAAACAAATGACTTAGAACCAGAATCAACTGAAGTTTTAACTATTTC
TACTCCAGAAGTTGCTATAGAAACTGAACAGACCCTTGCTGAAACCTTAATTTTATTTATGGAAGAAGCAGAAGAGCACT
TAGCGACAATTGATCAGTTTTTGGAAAAAGAAATACATCAGCATGAAAGTTATAATGCTTTAATACGTGCGTTACATACA
TTACGCGGCAGCTCTGCCATGGCTCATGTAGAACCAATCTTTGATGCCAGTACCAAAGTTGAGCATTTATTTAAAATACT
GTTACAAGAAGAGCTTTCTTCTCATTCAGAAGAAATTTCATTACTCCGTGATTATCGTCAGTTTATTCGAAATAGTTTGG
ATCTATTGGCTGCACATTACTCTACTGAGCAATTGGAATCTGATTTACAGAAATTTAATCAGGTTTGGGATGCTTACATG
GAGCAGCATGGTGAGCATTCGAGCCCACTTATGCCTCCACATGGTTTAGTGTCTCAGCTATTACAGCTAGATGTTGCTGA
ATTACTTGATGCGGAATTAGACTTTGAGAAGGGAATACGTACAGAGTTTCCTCATTATCTTGAACGTTTAAGTGAACAAG
CAGATGTTTTGCTGCAACATACTCAATCGCAGGCAATGATTGGTTTATATGAATATACTAACCAGTTGAAAGAAAGCTAC
GACATATTGCTTGATCGACCTGATTTATTGCAATCAGATTATGTTTTTGAAATTTATCAAAAAGCGCACCAACAATTAAT
TCAGTTATTTGATGCATTAGCCGCAGGACAAAGAGTAAGTATTATTGAGCAACACCAAAATGTCTTGGACGAGCTAAAAC
TATATACTCAATATATTCCAAATCTTAATTCCGAATCATTAGAAACTCATCAAGACGTTTTTGAACCATTGTTTAATGCT
GAAGTTGAACAAACAGCGAATGATCCTCTGATAGAAAATGTATTCACTGATCAGGTCACCATAGGGCAGAGTGTACAACT
AGATCGACAATTCATTTCATCTGAGCATGTAAACCGTCATTTTGATCCAGATCTTTTAGATATTTTTCTTGAAGAAGCCG
ATGAGTTGCTTGAGGGAATGGATACAGATCTTAATCTTTGGGTTGATGATCAAGAAAACTTTGCCGCTCTCAATAATCTG
ATGCGTTATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAACTTATATTGGTTTAATTGCACATGAGTTAGA
AAGTATTTATGAGCGTTTAATTCAAAAACAGTTGATAGCTTCGTCTGCTCTCATTGATTTTATTCGACTAGTTCAAGATG
ACTTGGCTGACCGTCTTCAAATAGTGCGTGAACAGCACCTAGATTATGCTGCTTCTCATACTATTCAAGCACTTAAAAAT
GCAGGTCAGGTATTTGATTCTCATATTAAAGAGAGCAAAACAGAACCTGAAACGTATGTTATACCTGAATTAAATTTTGA
AGTATTACAACAAGAAGCGATAAATAATACGGCGTTAAACCTCAGTGAGTTAACTTCTGGTTCTGAGCAGATTGCTAAGT
CTAATAATCAACTTGTTGAGCAAACCGAATTACAAGTTCTTTATGCTGATCACAATCATACAGAGAGTATCCCAGATCAA
GATATTAATACTGTTGTCGAGCAGACGTTTATGGAGGAAGCGGCCGAACTATTAGAAATGGCCGATCATCTATTAAAACA
ATGGTTCGAGCAACGTACTAACCGTAGTATCTTGCTTCAACTACAAAGGGCAGTGCACAGCTTGAAAGGCGGTTCCCGTA
TGTTGGGACTTGAAACCGTGCAAGCGATTGCTTATCAACTTGAGAATGCTTTTGAACAATTTGCGCTTCATCATTTCAGC
TCAAATATTTATGACAACTTATTAGAGAGTGCAATTGTCTGGTTAAAAGAGGCAATTTTTAAACAAAATTATCAACACTT
CGATGGTTTACAACAAAGTCTGGAAAATATCCAGTTCATTGAAACAGCAATTCAAATTCCTAGTAAGTTAACTAGAACTG
ATCTATTCAGCACGGAACCTGTAATGAGTTTTGTGCAAGGTGACGGTACAGAACCACCGCCAATGATGGGTGAGTGGGAA
CAAGCACAACGCCTTGATCAAAATAATGAGATGATTCGAGTCTCGGCAGATTTAATTGAAAAAATGATTGATCTGTCTGG
TGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATTTAAGCCAATTTGGTCATACCTTAGCGGAAATGGAATTGGCTA
TTCAGCGACTTGCAGATCAGTTGCGTCGAATGGAAGGCGAATTAGAAACCCAAATTATTGCAAAACACGGTATTGAGAAC
TCACGTTATACGGAATTTGATCCTTTAGAGATGGACCAATATTCTTCATTAAATCAGTTATCAAAGTCTCTTGCCGAGTC
TGCATCAGATTTAGTAGATTTTAAAAATACATTATCTGAAAAGATTAGAGACACTGAAGGTTTATTGGTACAGCAATCGC
GTATTCAGGCTGAAATTCAAGAAGGTCTCATGCGAACACGCTTAGTACCATTCTCTCGATTATTGCCTCGTCTACAAAGA
ATTGTGAGGCAGACCTCTACCGCGTTAAATCGACCAGCAGAGCTTTTTGTTAATAATACAGAAGGCGAGCTGGACCGGAC
AATGTTAGAACGTTTGGTTACGCCACTTGAGCACATGCTTAGAAACGCAATTGACCATGGACTAGAAGACCGTGTGCAAC
GTGAGCAAGCTAAAAAACCAGAAACGGGACGTATTGAACTCAATATTCATCGTCAAGGTACAGATGTTGTCGTTACATTT
AAGGATGATGGACAAGGAATTGATATCGAGAAGGTTCGTCAAAAGGCATTAATGTCTGGTTTGATTAACGCAGAACAAGT
ATTAGAACATCAAGATATTTTACAGCTGATTTTCCATCCTGGTTTAAGCACAGCCGATCAAGTTACTCAGATTTCAGGTC
GTGGTGTAGGACTAGATGTAGTACAAAGTGATATTAAAGCCTTAGGTGGCCACGTGAGTGTCGATTCTGTCTATGGGCAG
GGCACTGTCTTTACCATACGTGTTCCAACTACGGTAGCTGTTAGTGATGCCTTAATGGTTAAAGTTGCTGATCAGCAATT
TGCAATCCCATTGGCTCAAATTGATCGAATTGTGCGGGTTTCACCAGCCTCATTAGAACAATATTTCGGAAGTGCACAAG
AGTTCTTTGAATTTGAAAATAAGCGCTATCCATTACGTTATTTATCTGAGTTTGTTGGTAATCAACCCATTCCGCGTTTA
AGTGGAATGATGTATTCATTACCAGTATTAATGATTAAAGCAAATAATGGACAAACTATTGCATTATTAGTTGACCAACT
GATTGGCTCACGTGCGCAGATTGTAGTTAAACCAATCGGACAGCAATTCTCTAGTATTGGGGCGATTGCGGGAGCAACTA
TTTTAGGTGATGGCCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATCCAATCTACCCACCGACATAAG
TCGCTCAATGAAGCTATCTATAGACAACGTGAGTCTGACGAACGACGCCTTATCATGATTGTAGATGACTCGGTAACTGT
GCGTAAGGTAACGTCTCGATTACTTGAGCGTCAGGGCTATGATGTAGTCACCGCTAAAGATGGGGCCGATGCAATTGAGC
AATTGGAAAATATTAAACCAGATCTCATGCTGCTTGATATTGAAATGCCGCGCATGGATGGCTTTGAGGTTCTCAATCTT
GTTCGACATCATGATCTACATCAAGATATGCCAGTCATCATGATTACTTCAAGAACTGGTGAAAAACACCGTGAACGAGC
ATTTGCTTTAGGGGTTAATCAGTACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCGTTATTCA
TGACATTTGAAGGGGGACTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

79.92

100

0.803