Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   QRX25_RS15300 Genome accession   NZ_CP127224
Coordinates   2964566..2965474 (-) Length   302 a.a.
NCBI ID   WP_249199260.1    Uniprot ID   -
Organism   Bacillus sp. L381     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2959566..2970474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRX25_RS15265 (QRX25_15260) - 2959761..2960237 (+) 477 WP_212099076.1 Na+/H+ antiporter subunit E -
  QRX25_RS15270 (QRX25_15265) - 2960237..2960521 (+) 285 WP_045509491.1 Na(+)/H(+) antiporter subunit F1 -
  QRX25_RS15275 (QRX25_15270) mnhG 2960505..2960879 (+) 375 WP_115997042.1 monovalent cation/H(+) antiporter subunit G -
  QRX25_RS15280 (QRX25_15275) - 2960919..2961302 (-) 384 WP_212099079.1 hotdog fold thioesterase -
  QRX25_RS15285 (QRX25_15280) comA 2961324..2961968 (-) 645 WP_014472195.1 response regulator transcription factor Regulator
  QRX25_RS15290 (QRX25_15285) - 2962049..2964403 (-) 2355 Protein_2946 histidine kinase -
  QRX25_RS15295 (QRX25_15290) comX 2964381..2964551 (-) 171 WP_212099082.1 competence pheromone ComX -
  QRX25_RS15300 (QRX25_15295) comQ 2964566..2965474 (-) 909 WP_249199260.1 polyprenyl synthetase family protein Regulator
  QRX25_RS15305 (QRX25_15300) degQ 2965605..2965745 (-) 141 WP_289707641.1 degradation enzyme regulation protein DegQ Regulator
  QRX25_RS15310 (QRX25_15305) - 2966210..2966551 (+) 342 WP_115997039.1 hypothetical protein -
  QRX25_RS15315 (QRX25_15310) - 2966557..2967780 (-) 1224 WP_115997038.1 EAL and HDOD domain-containing protein -
  QRX25_RS15320 (QRX25_15315) - 2967910..2969376 (-) 1467 WP_115997037.1 nicotinate phosphoribosyltransferase -
  QRX25_RS15325 (QRX25_15320) - 2969394..2969945 (-) 552 WP_212099085.1 isochorismatase family cysteine hydrolase -
  QRX25_RS15330 (QRX25_15325) - 2970026..2970421 (-) 396 WP_013353403.1 DUF1694 domain-containing protein -

Sequence


Protein


Download         Length: 302 a.a.        Molecular weight: 34601.91 Da        Isoelectric Point: 5.2642

>NTDB_id=842835 QRX25_RS15300 WP_249199260.1 2964566..2965474(-) (comQ) [Bacillus sp. L381]
MKTIIEQMCLDAETIKGKMKEIVSVNLYNLDLIGTLGSFIDSKESFLFGNLAYNHYIAFNGDNRAEIELLAAGIELLILS
FDILDDHEDEDNDSAPWMKIDRSVSLNASTSLYTISLQLICSLQPIAKFSQLPLKYALEAMQGQHDDLRNLAETEEECLE
MIKHKSGSLTAMACVLGTLLGSGEYNETVENYSYFLGIIKQIENDYYGLFNEERSDIRKKRNNLIYLYLKRKFNPMSVTI
LNLINSKKDYQVLLSDKNKFKKKLWDAGVTQYISIMIKLYEDKITQELSKLNIKNKLSIIKH

Nucleotide


Download         Length: 909 bp        

>NTDB_id=842835 QRX25_RS15300 WP_249199260.1 2964566..2965474(-) (comQ) [Bacillus sp. L381]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCCGAAACGATTAAAGGGAAGATGAAGGAGATTGTAAGTGTTAACCT
TTACAATTTAGATTTGATCGGGACACTTGGTTCCTTTATCGACTCTAAAGAATCCTTTTTGTTCGGCAATTTAGCTTACA
ATCATTACATCGCATTTAATGGAGACAACAGAGCAGAAATTGAGTTACTGGCTGCCGGAATTGAACTGTTAATTTTGTCA
TTTGATATATTGGATGATCATGAAGATGAGGATAATGACAGTGCTCCTTGGATGAAAATTGACCGCTCAGTATCCCTAAA
TGCATCAACATCTCTCTATACAATTAGTCTACAGCTCATTTGTTCCCTTCAACCGATTGCGAAATTTTCTCAGTTGCCCT
TAAAGTATGCTTTAGAAGCAATGCAGGGACAACATGATGATTTAAGGAATTTGGCTGAGACAGAAGAAGAGTGCCTTGAA
ATGATTAAACATAAGTCTGGTTCACTTACAGCGATGGCCTGTGTACTTGGTACTTTACTTGGTAGCGGCGAGTATAACGA
GACAGTGGAGAATTATTCTTACTTTTTGGGAATTATTAAGCAAATAGAGAACGATTATTATGGGTTATTTAATGAAGAAC
GCAGTGATATTAGAAAAAAAAGAAATAATTTAATTTATCTGTATTTAAAGCGGAAATTTAATCCGATGTCGGTAACTATT
CTAAATTTAATAAACTCAAAGAAAGATTATCAAGTGCTACTTTCAGATAAAAACAAGTTTAAAAAAAAGCTTTGGGATGC
TGGAGTAACTCAATACATTTCTATAATGATCAAATTATATGAAGATAAAATAACTCAAGAATTAAGTAAACTAAATATTA
AAAATAAGTTATCTATTATAAAACATTGA

Domains


Predicted by InterproScan.

(64-215)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

54.225

94.04

0.51